Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00403 ATGGGGAAAAACCAGAGGGGGAAGAAGAAGAGCGAAGATTTGAGGTCCCTGATGCAGGTGTCCAATCGTTCAGAGGAAGAAATCTTGGCTGAAAACGTTACCGCTGATAGGCTTCTTGCTGATTGGTTCCTTAACAGTGATGAGCGTCAACAAGCGAACAGCCAAAGTAGAAAAGGAAAAGAGGTTTTAGAATCAACGTCAGGGGCTAATGATGAAGACAAAGCTGGTGGTAATGAACAGAGTGAATCAACACACGGGACTGATGATGCAGAACGGGGTAAAACAGCAGAGGAAGGAGACCTAGGGTCAGATTTTCCTCCACTTCCATCATCCGCAGCAAATGTTGTTATAAGGAACAGTAAGAATGTAATACAAACCCTTCTTATTGCTCTGCCTTGTCCTGTTACTATTATGTGCATTTTGAAAATTCTTAAAGATTATGTATGGTTTCTCACAAATGCTGCTACTGCTATGTATGTTTCATACCCTGACATATTGATGGGATGCATAACTCACTGTGAGGGACAGTCATCAGGAACAGCTGATTCCACATCAGTGTCTGCCCAAGTCCCTCCAGGATCTCAAACATCTTGGCTAGGAGGGACAAGAGGACGGATATCTTTTGCAGACAAGTTAAAGGGTGGGCCATCTCGAGGTGCTGTTCTTCATAACCCTTCTAATGCCTCAGGAACTTCTGCATCTGAAACGTTAGAGTCAAGCTCAAATCCTCCATGTCATAATCATTCTGAGCAGCCAAATACTGACAATTCACAAACATTAAACATGACTGCATCATCAAATGCTAATGAGCCATCTGAGCATCAAAGTTTGAATGATACTGCTGCTGCAGTTAGTTTGGGCGGGGACAGTGAATTAGATGCTGCCCAAGATCCACCTGCGGATCTTGCTGGTGGTATTTTGGATGAAATTGATTCTATTATGAGCAGAATTGATTGTCAGAGTTCTGATGAGCACCACAGAGAATCTGTAGAGAGCAATATAGAAGTTGGTGCAGGTAATATTCGATTCAGGCCATTATTGACTAGTGATGCCTTTGTAGATGTGCGATCACCAGAGAATAACAGTTCAGTGCGTTATGCAAGTCATATACGAGACTTCGCTGATGACTCTCAACTCTTCAATTTTGCTTTATTTGAATATAAAACTATTTTTCCTGAAAGCCACCAGTCTTTGTCATCTCCTTCCCTGTCTCCTGCAAGAGAAGCAACTGTTGATACAAGTCTTTTCTCTCCATTGCAAAATCCTAGAAGGTCCCAGTCTCATTCATCTCTTCCCGGCCCCACTGATGATCGTGGAAGCTTTCAGTCTAATCCAACTCGTCGTCATTTTAGTTCCCCTAACTTCAATCAGAATGATGGTGCACGTAACTTAAGAGGCAGAGGCTCTATACAACGGGTTAGGACACCCCCCCAAAATTTTATGGCTCAGTCCTCAACACGCATGGAACAATTTGTCAATGCAAGACCATATCACCCTCTACACCAGAACCAGCCATATACAACAACCATGCATCCGTCTATAGAACACGCTCCAGAGCAAGCTTTACTAGGTAGTAATGTATATGGATATGACCAATCTTCAGCAAGCATGAACTACAACTACAACCCTCCACAAAATAGAAATGAATTCCCTGTGAGCGGATTGCCTCCTTATCGAAGTCTTCGATATCCCTTCTATGGTCCTTCAAGTAACTTAAATCAGTTTTTACCTTCTCAGCATCATGGTGCCCGTAACATTAGAAGCTCTAATCAACGGCATGGTGCCCTTTCTCCACCACCGGAATATTATGGTCCCTTTTCTCCACCACGGGATTATGAGGCTGGCCCAAGTTCTTTGCTTATAGAAGGGGCCAGACATTATGGTTTACAGATGCTTGGCGTTAATTCAATTGTACATACATTAGAGAGAATTGAGCATGCCTTCTGTGATTCTGGCATGATACTGTATGACACGAGGCGCCATGGTTTTTTTCCTTTAAAGGGCAATATCCCAAAGTGTCTTGTGTTTAGTGAAATGGATAGAAAGCAAGAACAGGACAAGGGGAACCTGAATATGTCTGGCATTGATGTTACTCTAACATCTCCCAAAGTTCCAAAAGCAGTTTCACCAGTTTCTTCTGCAGCAGAGGGGGAAACCTTGAGGCGACCTCGTGGCCGGCCGGCTGGCTCTAAAAACAAACCTAAGCCACCAATAATTGTCACCAGAGACAGTGCTAATGCACTCAAGGCTCATGCCATGGAAGTGAGCTCTGGCTGTGATGTGAATGAAAGTTTGTTAAACTTTGCAAGAAGAAAGCAACGTGGCCTTTGCATACTTAATGGGACTGGCTGTGTAACAAATGTAACACTGCGCCAGCCAGCTTCATCTGGTGCCATTGTGACCCTTCATGGTCGTTTTGAGATTCTCTCATTGCTGGGGTCAATCCTTCCCCCACCAGCACCACCAGGAATCACAGGGCTTACAATATACTTAGCAGGTGCTCAAGGGCAAGTTGTGGGAGGTGCTGTAGTTGGTGCTTTGATTGCTTCAGGCCCAGTTGTAATCATGGCTGCATCATTCATGCATGCTACTTATGATCGTCTGCCACTTGAAGATGATGAACTTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGACGCACCCATCATCTTGATATCTCAGACTTATATGCAATGCCACAAAATCTGCTCATGAATGGTGCTATGCCCCCAGAGATATACTCTTGGGCACCAGGGAAGAACTTGTCAAAAACCTGA 2781 0.4416 MGKNQRGKKKSEDLRSLMQVSNRSEEEILAENVTADRLLADWFLNSDERQQANSQSRKGKEVLESTSGANDEDKAGGNEQSESTHGTDDAERGKTAEEGDLGSDFPPLPSSAANVVIRNSKNVIQTLLIALPCPVTIMCILKILKDYVWFLTNAATAMYVSYPDILMGCITHCEGQSSGTADSTSVSAQVPPGSQTSWLGGTRGRISFADKLKGGPSRGAVLHNPSNASGTSASETLESSSNPPCHNHSEQPNTDNSQTLNMTASSNANEPSEHQSLNDTAAAVSLGGDSELDAAQDPPADLAGGILDEIDSIMSRIDCQSSDEHHRESVESNIEVGAGNIRFRPLLTSDAFVDVRSPENNSSVRYASHIRDFADDSQLFNFALFEYKTIFPESHQSLSSPSLSPAREATVDTSLFSPLQNPRRSQSHSSLPGPTDDRGSFQSNPTRRHFSSPNFNQNDGARNLRGRGSIQRVRTPPQNFMAQSSTRMEQFVNARPYHPLHQNQPYTTTMHPSIEHAPEQALLGSNVYGYDQSSASMNYNYNPPQNRNEFPVSGLPPYRSLRYPFYGPSSNLNQFLPSQHHGARNIRSSNQRHGALSPPPEYYGPFSPPRDYEAGPSSLLIEGARHYGLQMLGVNSIVHTLERIEHAFCDSGMILYDTRRHGFFPLKGNIPKCLVFSEMDRKQEQDKGNLNMSGIDVTLTSPKVPKAVSPVSSAAEGETLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLCILNGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPVVIMAASFMHATYDRLPLEDDELAAAMQNQHYQNGRTHHLDISDLYAMPQNLLMNGAMPPEIYSWAPGKNLSKT. 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00403 926 MobiDBLite consensus disorder prediction 1 20 - -
Seca7g00403 926 MobiDBLite consensus disorder prediction 49 63 - -
Seca7g00403 926 MobiDBLite consensus disorder prediction 216 278 - -
Seca7g00403 926 MobiDBLite consensus disorder prediction 415 483 - -
Seca7g00403 926 MobiDBLite consensus disorder prediction 75 99 - -
Seca7g00403 926 MobiDBLite consensus disorder prediction 705 738 - -
Seca7g00403 926 MobiDBLite consensus disorder prediction 222 278 - -
Seca7g00403 926 CDD DUF296 751 831 IPR005175 -
Seca7g00403 926 MobiDBLite consensus disorder prediction 178 202 - -
Seca7g00403 926 ProSiteProfiles PPC domain profile profile. 745 883 IPR005175 -
Seca7g00403 926 Gene3D - 749 884 - -
Seca7g00403 926 SUPERFAMILY AF0104/ALDC/Ptd012-like 745 877 - -
Seca7g00403 926 Pfam Plants and Prokaryotes Conserved (PCC) domain 750 860 IPR005175 -
Seca7g00403 926 FunFam AT-hook motif nuclear-localized protein 748 889 - -
Seca7g00403 926 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 706 888 IPR014476 GO:0003680
Seca7g00403 926 MobiDBLite consensus disorder prediction 49 108 - -
Seca7g00403 926 MobiDBLite consensus disorder prediction 1 30 - -
Seca7g00403 926 MobiDBLite consensus disorder prediction 415 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00403 Seca-Chr7 4175341 4181029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00403 704 923 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 74.208 4.40e-97 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00403 - - gmx:100804941 429.098