Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00395 ATGGATGAGGAAAACACACAAACACACACAATCATACCCACATTTCATAGAAAACCAGAGGAATCCATCCAAAATTCTGCTATGGACACTCACAAGTCTTTGCATGTCTTCAGGAGAAGCAGGAGGCGGTGGAGAACAGAGGTGGTAAAGGAAGTGACAGTGAAAGAGGATGTGAAGGACAAAGAAAAAGAAAAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATAATGATAGGGAAGAGATAGAGAGGAAGATTCATGCATTGCAGAGGATTGTGCCTGGTGGAGAATCCTTAGGTGTGGACAAGCTGTTTGATGAAACTGCAGGGTATATTGTGTCCTTGCAGTACCAAGTCAAAGCATTGAGGACTCTTGCTGGTTTCTTTGAGAAGTTGGACAAGGAGAAGACAAAGTTTGGAGGTTGA 429 0.4219 MDEENTQTHTIIPTFHRKPEESIQNSAMDTHKSLHVFRRSRRRWRTEVVKEVTVKEDVKDKEKEKEKEEEEEEEEEDNDREEIERKIHALQRIVPGGESLGVDKLFDETAGYIVSLQYQVKALRTLAGFFEKLDKEKTKFGG. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00395 142 MobiDBLite consensus disorder prediction 1 31 - -
Seca7g00395 142 Coils Coil 51 93 - -
Seca7g00395 142 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 29 130 IPR044660 GO:0006355
Seca7g00395 142 CDD bHLH_AtIBH1_like 85 127 IPR044549 GO:0006355
Seca7g00395 142 MobiDBLite consensus disorder prediction 55 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00395 Seca-Chr7 4104526 4104975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00395 80 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 42.623 1.17e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00395 - - gmx:100817215 150.984