Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00389 ATGAGTTCCCCTACAGTTCAACGCGTTTCGGAATGTTTTATCAAGCCGGTGCAGGCCATTGAAGGGTCAAACCATATCTGCTATTTAACCCCTTGGGATATTACTATGCTGTCTTTGAACTACATCCAGAAGGGCCTCCTATTCAAAAAGCCCTCATCAATTGATAATCTGTTGGAGAAGCTCAAGCACTCCCTTTCTGTTGCCCTCTTCCATTTCTATCCCTTGGCTGGCCGCCTTGTCACTCAAAAAACCCAACACCCTCCCTCTTATTCTATCTTCGTTGATTGCAAAAACAGTTCTGGTGCTAAATTTATCTATGCAACTCTAGACATCACAATATCCGACATCCTCTCCCCTGTTGACTTTCCACCGCTCCTTCAGTCACTGTTTGATCTCAACAGAGCAATCAACCACGATGGTCACACCTTGCCCTTGTTATCCATCCAAGTCACCCAACTCCTGGACGGTGTTTTTATTGGTTGTTCCATAAACCACTGTATCGCTGATGGGACTTCTTATTGGAACTTCTTTAATACATGGTCTCACATCTTTCAAGATGTTCCTGTTTTACACCCACCCCTTCACAATCGTTGGTTTCCAGAGGGATGTGGTCCACTAATCAATCTTCCCTTCAAACATCACGATGAGTTTATCGACAGATATGAACCACCCAAATTGAGGGAGAGGATCTTCCACTTTTCAGCAGAGTCTATTGCGAAACTAAAAGCAAAGGCTAACTTACAATCAAATACAAATAGTAGCACCAAAATCTCTTCGTTTCAATCCTTATCAGCTCATGTTTGGAGATCCATAACTCGCGTGCGCGGCCTAACACATGATCAGAAAACAAGTTTTGTGTTATATGTAAACAATCGACCGAGAATGGAACCGCCTCTGCCAAACGAGTACTTTGGGGCATCAATTAATGTGGTGACTGCAGAGGCGAAGGCAGGGGAGTTGGTTGAGAATGATCTGGGATGGACAGCATGGAAGGTTCACCTTGCTGTTGCAAACTTTAACGACAGTGTGGTGCATCAATTGCTTAAAGATTGGTTACAATCTCCTCTTGTCTTCCAACCTAGTCTCCACTTTGATCCATGCACTGTGGTGATGTCAAGCTCACCAAGGTTTAACATGTATGGGAATGAATTTGGAATGGGGAAAGCTGTGGCTGTTAGAAGTGGGTATGCTAACAAATTTGATGGTTGGCTGACAGCATATGAAGCATATGAAGGAGGGGGAAGCATAGATTTGGCTGTGTGCCTTTTGCCTCATGCAATGACAGCCTTGGAATCAGACCACGAGTTTATGGAGGCAGTTTCTCACTCCAATCCCCTCTACTAG 1344 0.4427 MSSPTVQRVSECFIKPVQAIEGSNHICYLTPWDITMLSLNYIQKGLLFKKPSSIDNLLEKLKHSLSVALFHFYPLAGRLVTQKTQHPPSYSIFVDCKNSSGAKFIYATLDITISDILSPVDFPPLLQSLFDLNRAINHDGHTLPLLSIQVTQLLDGVFIGCSINHCIADGTSYWNFFNTWSHIFQDVPVLHPPLHNRWFPEGCGPLINLPFKHHDEFIDRYEPPKLRERIFHFSAESIAKLKAKANLQSNTNSSTKISSFQSLSAHVWRSITRVRGLTHDQKTSFVLYVNNRPRMEPPLPNEYFGASINVVTAEAKAGELVENDLGWTAWKVHLAVANFNDSVVHQLLKDWLQSPLVFQPSLHFDPCTVVMSSSPRFNMYGNEFGMGKAVAVRSGYANKFDGWLTAYEAYEGGGSIDLAVCLLPHAMTALESDHEFMEAVSHSNPLY. 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00389 447 Gene3D - 1 204 IPR023213 -
Seca7g00389 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 438 - -
Seca7g00389 447 Gene3D - 214 432 IPR023213 -
Seca7g00389 447 Pfam Transferase family 12 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00389 Seca-Chr7 4030033 4031376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00389 48 431 Monolignol Biosynthesis Gene Families AT5G48930 29.902 1.03e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00389 - - gmx:100788297 656.751