Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00372 ATGTTTTTTAGCATTCTGTCATCAAATGCATTCACAGGAGCATTGCCATCCTCATTTTCCAAGTTGACCAAGTTGACTGATTTGAGGATAGGTGACAATAATTTCAATGGGAAGATACCTGATTTCATTAGTAAATGGGTATTGATTGAAAAGCTGCACATGCATGGTTGCTCTTTTGAGGGGCCCATTCCTTCAAGCCTTTCTGCCTTGACAAGATTAAGTGATTTGAGGATAACTGACCTAAAAGGTAACAGAAGCTCTGCTTTCCCACCACTAAATAATATGAAATCCATGAAAACACTGATATTGAGAAAATGCATGATTAAAGGAGAGATCCCCGGCTATATTGGGAGAATGGAAAAACTGAAAATCTTAGATTTGAGTTTCAATAGCTTGAGTGGAAAGATACCTGAATCTTTTACCCAACTTGACAAAGTGGACTACATGTATCTTACTGGGAACAAGCTATCAGGGACTATACCTGTCTGGGTCCTTGGAAATAACAAAAATATTGATGTCTCTTACAATAACTTCACCTGGGATAGCTCAAGTCCAACTGAATGTCAACGAGGGAGCGTAAATGTTGTGGAGGGATACTCTTCATCTGCGGATACACAAAGTAAGGTTCATCCGTGCCTAAAAAGGAACTTTCCATGCCCTGCTTCAGTTAGCAAATATCATTACTCCCTGCACATTAATTGTGGTGGTAATGAAGCAAATATTAATGATCAAATTTATGAAGCTGACAGAGAAAGGAAAGGTGCTTCAATGTTATATTACACTGGTCAGGATTGGGCTCTTAGTAGCACAGGGAACTTTTTGGACAATGACATTGACTCTGATCCCTATACTGTGGCCAATACTTCTAGACTTCTTAATGTCTCTGCACTCAATTCAAAACTGTACACAACAGCTCGTGTTTCTGCCCTTGCTCTCACATACTATGGCCTCTGTCTAATAAATGGAAATTACACTGTTAAGCTTCACTTTGCAGAGATTATTTTCATCAATGATAGGTCATTTAACAGCCTTGGGAAGAGGGTGTTTGATGTCTACATCCAGGGGAAATTGGTGCTGAAAGACTTTGATATCCAAAGAGAAGCTGGTGGTACTGGCAAGCCAATTGTGAGGACATTTAATGCTACTGTTACAGAACATACTTTGAAGATTCACTTCTACTGGGCTGGAAAAGGAACCACTGGCATACCAACAAGAGGAGTTTATGGACCTCTAGTATCTGCTATTTCAGTAAATCCTAATTTTAAACCTCCATTAGAGCATGGCAACAGAACTTATGTCATACTGGCAGTTAGCATAGTGGCTTGTGTTTTAGTTGTTGTTCTTATGGTGCTAGCTGTCATGAGGAGAAAGGGATGGTTAGGAGGCAAGGATCCAGTGTATAAAGAGCTTAGGGGTATAGATCTGCAGACGGGACTATTTACTTTGAGACAAATCAAAGTAGCAACCAAAAACTTTGATGCATCATATAAAATTGGTGAAGGTGGCTTTGGTTCAGTTTACAAGGGCCTACTATCAGATGGTACAGTAATTGCAGTAAAGCAGCTCTCTTCAAAATCTAAGCAAGGAAACCGCGAGTTTGTGAATGAGATAGGAATGATATCTGGACTTCAACATCCTAATCTTGTTAGACTTTATGGATGCTGTGTAGAAGGGAACCAGCTAATACTGATATATGAATATATGGAAAATAATTGTCTATCTCGCATTCTTTTTGGGAAGGATCAAGGCAACAGAAAGAAACTGGACTGGCCAACCAGGAAGAAAATTTGCCTTGGTATAGCTAGAGCTTTGGCTTATCTCCATGAAGAGTCTAGAATAAAAATCATTCATAGGGATATAAAGGCAAGTAATGTGTTGCTCGACAAGGATTTCAATGCCAAAATTTCAGATTTTGGTTTGGCAAAACTTATTGAAGATGACAAAACCCATGTTAGCACCAGAATTGCAGGAACAATTGGTTATATGGCTCCAGAGTATGCAATGCGTGGCTATTTAACTGACAAAGCAGATGTTTATAGCTTTGGGGTGGTTGCATTGGAAATTGTCAGTGGAAAAAGCAATACAAATTACAGGCCAAATGAGGATTTTGTTTACCTTCTTGATTGGGCCTATGTTTTGCAAGAGAGAGGAAATCTTCTGGAGCTGGTTGATCCAGATTTGGGTTCAGAATACCCAAGTGAGGAGGTGATGGTAATGCTAAATGTGGCTCTTTTATGTACTAATGCATCTCCTACACTAAGGCCAACAATGTCCCAAGCTGTGAGCATGCTTGAAGGTTGGACTGACATTCAGGATCTACTTTCTGATCCCGGATATTCAGCTGCCAGTTCCAGTTCCAAATATAAGAGTATGAGAAGTCACTTCTGGCAGAATCCAAGCAGAACACAAAGCATGTCAATACCAAGCGTATATACTAATTCCTCTTCCTCACATGCTGAAACAGAAGAAAACTACCATCTTATAAAAAGTAACTCAAATGGATCAGACAAGTGA 2514 0.3954 MFFSILSSNAFTGALPSSFSKLTKLTDLRIGDNNFNGKIPDFISKWVLIEKLHMHGCSFEGPIPSSLSALTRLSDLRITDLKGNRSSAFPPLNNMKSMKTLILRKCMIKGEIPGYIGRMEKLKILDLSFNSLSGKIPESFTQLDKVDYMYLTGNKLSGTIPVWVLGNNKNIDVSYNNFTWDSSSPTECQRGSVNVVEGYSSSADTQSKVHPCLKRNFPCPASVSKYHYSLHINCGGNEANINDQIYEADRERKGASMLYYTGQDWALSSTGNFLDNDIDSDPYTVANTSRLLNVSALNSKLYTTARVSALALTYYGLCLINGNYTVKLHFAEIIFINDRSFNSLGKRVFDVYIQGKLVLKDFDIQREAGGTGKPIVRTFNATVTEHTLKIHFYWAGKGTTGIPTRGVYGPLVSAISVNPNFKPPLEHGNRTYVILAVSIVACVLVVVLMVLAVMRRKGWLGGKDPVYKELRGIDLQTGLFTLRQIKVATKNFDASYKIGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVRLYGCCVEGNQLILIYEYMENNCLSRILFGKDQGNRKKLDWPTRKKICLGIARALAYLHEESRIKIIHRDIKASNVLLDKDFNAKISDFGLAKLIEDDKTHVSTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPNEDFVYLLDWAYVLQERGNLLELVDPDLGSEYPSEEVMVMLNVALLCTNASPTLRPTMSQAVSMLEGWTDIQDLLSDPGYSAASSSSKYKSMRSHFWQNPSRTQSMSIPSVYTNSSSSHAETEENYHLIKSNSNGSDK. 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00372 837 SUPERFAMILY L domain-like 6 180 - -
Seca7g00372 837 Gene3D Transferase(Phosphotransferase) domain 1 568 776 - -
Seca7g00372 837 Pfam Protein tyrosine and serine/threonine kinase 496 763 IPR001245 GO:0004672|GO:0006468
Seca7g00372 837 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 462 567 - -
Seca7g00372 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Seca7g00372 837 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 227 420 - -
Seca7g00372 837 CDD STKc_IRAK 498 766 - -
Seca7g00372 837 MobiDBLite consensus disorder prediction 797 837 - -
Seca7g00372 837 Gene3D Phosphorylase Kinase; domain 1 466 567 - -
Seca7g00372 837 SUPERFAMILY Protein kinase-like (PK-like) 476 798 IPR011009 -
Seca7g00372 837 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 801 - -
Seca7g00372 837 ProSiteProfiles Protein kinase domain profile. 492 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00372 837 SMART serkin_6 492 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00372 837 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 46 194 - -
Seca7g00372 837 Gene3D - 226 420 - -
Seca7g00372 837 Pfam Malectin domain 229 415 IPR021720 -
Seca7g00372 837 Pfam Leucine rich repeat 98 156 IPR001611 GO:0005515
Seca7g00372 837 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Seca7g00372 837 FunFam Putative LRR receptor-like serine/threonine-protein kinase 568 776 - -
Seca7g00372 837 Gene3D Ribonuclease Inhibitor 3 190 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00372 Seca-Chr7 3875390 3882561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00372 28 828 Receptor kinase-like Gene Family AT1G07650 64.771 0.0 1022
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca7g00372 PK_Tyr_Ser-Thr 1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00372 - - vun:114195543 1424.84