Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00361 ATGATCTGCACGGTGAAACAACCTGGTATATCGATCAGAGGTTCCGATGTTGTTCTCCGGAAAAGGGGTTCAACCCCAGTTCAGCCATGTTCCCTTGTTTTACCTTCTATCTCTAGAGAAAAGGCTCCGAGATCTCTGGTTTCAGTGCAAAAGCCACTGCACCTTTCTTGTGTTGGTGTTGGGAATTTTGTTGGGTCAGTGAGGCGTGAAAGAAGTGATTTGGTAAAGTGTGGAGCTTATGAGGCTGATAAATCAGAGGTTGGAGGAGCTGGGGCTCCATCAGAGGCTGCTAAGAAGGTGAAAATTGGGATTTACTTTGCAACCTGGTGGGCACTGAATGTGGTGTTCAATATTTATAACAAGAAGGTGTTGAATGCATACCCCTACCCTTGGCTTACTTCAACTCTCTCGCTTGCATGTGGGTCTCTTATGATGTTGATCTCATGGGCCACCAGGATAGCTGAGGCACCTAAGACTGATCTTGAGTTTTGGAAGACTTTGTTCCCTGTTGCTGTTGCACATACAATAGGACATGTAGCGGCTACTGTTAGCATGTCAAAAGTTGCAGTATCATTCACCCATATTATCAAGAGTGGCGAGCCTGCTTTCAGTGTACTTGTTTCCAGATTTCTTTTGGGTGAGACCTTCCCAGTGCCGGTATATCTGTCTTTAATTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGACTGGTTTTATGGGAGCTATGATATCAAATTTGGCATTTGTATTCCGTAATATCTTTTCAAAAAAGGGCATGAAGGGAAAGTCTGTCAGCGGAATGAATTACTACGCATGTTTATCTATGTTGTCCCTGTTAATTCTGACACCGGTTGCAATTGCTGTGGAGGGACCACAGATGTGGGCAGCTGGATGGCAAACAGCCATCTCTCAAATTGGACCCCAGTTTATATGGTGGGTGGCAGCTCAGAGCGTATTTTATCATCTGTACAATCAGGTTTCATACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGTGTTGGAAACACCATGAAACGTATATCTGTTATAGTTTCTTCAATCATTATCTTCCACACACCAGTTCGGCCTGTCAATGCTCTTGGAGCCGCCATTGCCATCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAGTAG 1182 0.4442 MICTVKQPGISIRGSDVVLRKRGSTPVQPCSLVLPSISREKAPRSLVSVQKPLHLSCVGVGNFVGSVRRERSDLVKCGAYEADKSEVGGAGAPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPVAIAVEGPQMWAAGWQTAISQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFHTPVRPVNALGAAIAILGTFLYSQAKQ. 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00361 393 Pfam Triose-phosphate Transporter family 101 389 IPR004853 -
Seca7g00361 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 236 - -
Seca7g00361 393 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 392 IPR004696 GO:0016020|GO:0022857|GO:0055085
Seca7g00361 393 PANTHER SOLUTE CARRIER FAMILY 35 101 392 - -
Seca7g00361 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 292 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00361 Seca-Chr7 3641366 3646690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00361 1 392 Antiporters AT5G54800 76.238 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00361 K15283 - gmx:100776233 655.595