Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00358 ATGAACGAGTTTGGCGAAGGATGTAGCAGGATGAATGGGGAGGAGCCAATGATGGAGGCATTGAATGATTTGAGGTTGGAATCAGAAGAGGTGCGTAGTGGTGAAGACACGGAAGGTGATTACGTTGTGAACGATGAAGAAGAAGCAGAGGATAAGGGGGGAGGTTTTCGGTATAGGTGTGTTGAGGATAACGGCGGAAACAATGATGGTGAACGTATAGAAATTAATAATGTCGGGGATATAGTGAAGTTGGATTTAAAGAATTTATGCCCGCATGAGGTTGGTTTATATTATGATTTTCAGAGTTTGGAATTGGCTGCCGAGTTTTATAAAAGTTACGCAAGGAAGAACGACTTTGTTGGTCGTGAGGGTAAGAAAAGGCACAATAAAGATGGAGTTGTGATACAACAAGCGTTTGTTTGCAACAGGGAAGGATTCAGAAGAGAGAGAGATGGTGGCACCCCGTCACAACGAAAACGACGTGCTAATACGAGGTGTGGCTGTAAGGTAGAATTCCGTGTGCATGTTAATGTGTTGTCTGGTAGGTGGTATACGTCCACCACACATATTGGCTGCATTCGCTCGTCAGGCAGGGGGTATGAGAAGGTAGGGTTTCGTAAAAAGCACATGTACAACCAGATTGGTCAGCAAAGGCGTAACCAAGGTGATGATGGGAAAAGTGCTATAGGCTATCTACAATGGTTGGGCTTAAAGGATTCCCTAATGTGTTGTAAACACGTAGAAGATGCAAATGGGAGCGTCAGACACATGTTTTGGTCTGATGGTCTAAGCCAGATTAGCTACCAAGCATTCGGTGATGTTTTAGCATTTGATGCTACTTACCGTAAGAACAAGTATCGATATCCCGTGGTTATATTTTCAGGTGTCAATCACCATAACCACACAACTATTTTTGCATGTGGGATAGTTTCAAATGAGACAGAAGAGACTTATGTTTGA 960 0.4323 MNEFGEGCSRMNGEEPMMEALNDLRLESEEVRSGEDTEGDYVVNDEEEAEDKGGGFRYRCVEDNGGNNDGERIEINNVGDIVKLDLKNLCPHEVGLYYDFQSLELAAEFYKSYARKNDFVGREGKKRHNKDGVVIQQAFVCNREGFRRERDGGTPSQRKRRANTRCGCKVEFRVHVNVLSGRWYTSTTHIGCIRSSGRGYEKVGFRKKHMYNQIGQQRRNQGDDGKSAIGYLQWLGLKDSLMCCKHVEDANGSVRHMFWSDGLSQISYQAFGDVLAFDATYRKNKYRYPVVIFSGVNHHNHTTIFACGIVSNETEETYV. 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00358 319 Pfam MULE transposase domain 274 318 IPR018289 -
Seca7g00358 319 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 99 319 IPR031052 GO:0006355
Seca7g00358 319 Pfam FAR1 DNA-binding domain 108 185 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00358 Seca-Chr7 3613136 3614732 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g00358 FAR1 2.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00358 - - tpra:123886262 242.662