Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00348 ATGAGTGTCCTCCTTCTTAGTATCCTCTTACTCATCCCAATTATCCTCTTGTTTAGAAGAAGTAAACCATCCAAAAGGGTCCCTCCAGGTTCACTTGGAATTCCCATTATTGGTCAAAGCCTTGGCCTTCTTCGAGCTATGCGTGCCAACACTGCAGAACAATGGGTTGAAGAAAGAATCAACAAGTATGGTCCTGTTTCAAAGCTAAGCCTCTTTGGAAAACCAACAGTTTTAATCTATGGACAGGCTGCAAATAAGTTTATATTCACCAATGGTGGTAACACAATTGCTAACCAGCAAACACAGTCCATCAAAAAGATCTTGGGTGACCGTAACTTGCTGGAACTGAGTGGGGAAGATCATAGCCGAGTCAGAGGTGCACTTGTCTCATTCTTGAAACCAGAATCCTTGAAGCAATATGTAGGGAAAATGGATGATGAAGTTAGGAGGCACCTTGAGATGCATTGGCAAGGGAAACAGCAAGTTAAGGTATTGCCCCTTATGAAGACGCTCACATTCAACATAATTTGCTCTCTTCTGTTTGGTCTTGAGCGTGGAAAACAAAGAGATCAATTCCTGACTTCCTTCCAAGCAATGATTGAAGGAATGTGGTCAGTTCCAGTTAACATGCCCTTCACACGCTACAACCGCAGCCTCAGAGCAAGTGCAAGGATTCAGAACATATTGAAGGAGATTGTGCACCAGAAGAAAATTGAACACAAGAAAAATGGAGCCTCTGCCAACCAAGACTTGATCAGTTGTTTGCTTGGCATGCTTGATGAAGATGACAAACAAGTTATGACTGAGAAAGAAATCATTCATAATGTTATGCTTGTCATGGTTGCAGGACATGACACTTCATCTGTTCTCATCACTTTTATTATCCGCCTCTTATCTAATGAACCTGCTATTCATGCTGCAGTTCTTCAAGGTATATGCCTAGATGAGTATTTAGGCAAAGAAATCTATATATTTGGTTATATGGTTGCAGAACAGGAAGAGATAGCTAAGAGCAAGCCCTCAGGAGAGCCACTGACATGGGAAGACCTATCAAAGATGAAGTACACCTGGAGAGTAGCAATGGAAACTCTTAGGATGTTTCCTCCTATCTTTGGTGGCTTCAGAAAGGCTGCAACAGATATTGAATATGGTGGATACCTTATACCTAAAGGGTGGCAGATTTTCTGGGTTACAGCAATGACCCACATGGACAATAGCATTTTTCCAGAACCATCAAAGTTTGATCCAAGTAGATTTGAAAACCAAGCATCTACCCCACCCTACTGCTTCATACCATTTGGAGGGGGAGCAAGAATATGTCCAGGATATGAGTTTGCAAGGATTGAGACTCTTGTGGCAATTCATTACCTTGTGACTCGATTCAATTGGAAGCTATGTTCTGACAATTTCTTCAGGAGGGATCCAATGCCAGTGCCTACTCAAGGGTTACTAATTGAAATTTGGCCAAGGAAACTTCCTTAG 1482 0.4197 MSVLLLSILLLIPIILLFRRSKPSKRVPPGSLGIPIIGQSLGLLRAMRANTAEQWVEERINKYGPVSKLSLFGKPTVLIYGQAANKFIFTNGGNTIANQQTQSIKKILGDRNLLELSGEDHSRVRGALVSFLKPESLKQYVGKMDDEVRRHLEMHWQGKQQVKVLPLMKTLTFNIICSLLFGLERGKQRDQFLTSFQAMIEGMWSVPVNMPFTRYNRSLRASARIQNILKEIVHQKKIEHKKNGASANQDLISCLLGMLDEDDKQVMTEKEIIHNVMLVMVAGHDTSSVLITFIIRLLSNEPAIHAAVLQGICLDEYLGKEIYIFGYMVAEQEEIAKSKPSGEPLTWEDLSKMKYTWRVAMETLRMFPPIFGGFRKAATDIEYGGYLIPKGWQIFWVTAMTHMDNSIFPEPSKFDPSRFENQASTPPYCFIPFGGGARICPGYEFARIETLVAIHYLVTRFNWKLCSDNFFRRDPMPVPTQGLLIEIWPRKLP. 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00348 493 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 PANTHER CYTOCHROME P450 26 25 478 - -
Seca7g00348 493 CDD CYP90-like 59 489 - -
Seca7g00348 493 FunFam Taxadiene 5-alpha hydroxylase 18 490 - -
Seca7g00348 493 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 Pfam Cytochrome P450 332 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 Pfam Cytochrome P450 28 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 SUPERFAMILY Cytochrome P450 19 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00348 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Seca7g00348 493 Gene3D Cytochrome P450 19 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00348 Seca-Chr7 3557893 3561255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00348 8 469 Cytochrome P450 AT5G45340 30.388 9.85e-71 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00348 - - gmx:100790001 823.157