Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00346 ATGGCGGACGTTGGTCTCTCCATTGCAGCCAAGCTTTTAGAATATTTGGTGGAGCCTTTGTTGCACCAAGCTCGTTATGTGTTATGTTTGAACAAAATTGTAAGAAACCTTCATGAAGAAAAAGAAAAGTTGATTTTATCTCAAAGGAATGTGAAGGAACATATCAAAGAAGCCAAAAGGAAAACTGAAATAATTGAGGAAAGTGTAGAGAGGTGGATGAATGATGTGAGGACTATTTTAGAAGAGGTACAAAAACTGGAAGAAAAAACTGAAGAAAACAATAAGTGTTACCGTGTGCCTTTCCACTACTTCCTATCAAAAGAAGTAGCAAGTGTGACTGAGAAAATGATGAAGCTAAACAACTACAAATTTGAGCAATTTTCTAGGCGCACTGAACTTCCTGGCATGCAATACTTTTCATCCAAAAACTTTGTGTATTCCAAGTCTACAGAGAATGCTTATAATGAACTCATGGAGGCACTGAAAGATGTAAACAATCATATGATTGGATTCCATGGGATGGGAGGATCCGGGAAAAGCACGTTGGTGAAAGAGGTGGGGAAGAAAGCTCAGGAGTTACACCTTTTTGACAAGGTTGTGATTGTTGTTGTCTCTCACAATCCATTACTGACAAAAATCCAAGGTGAAATTGCAGACAGTTTGGGTTTGATATTGAGGGAAGAGACAGTATATGGCAGGGCACAAAGACTATCATTGAGTTTACAGAATGAGAGGACTCTTGTGATCTTGGATGATGTATGGGAGAAGCTTGACTTTGAAGCTATTGGGATTCCACCCAATTGCATTGTCCTTCTAACTACTCGTGGTAGAGATATATGTGTTTCTATGAACTGCCAAGTTATAGTTGAGTTGTCTCTCTTAGATGAAGAGGAAGCTTGGACTTTGTTTAAACGGTGTGCAGACATCATTGATGACTCACCATATGCCTTGAAGTTAAAGAATGTGCCAAGGAAAATTGCTAAAAAATGTAGAAGATTGCCTATTGCAATTGTGACCATGGCAAGTATGTTAAGAGGAAAGAAATTTGAAGAGTGGGAGTTAGCATTGCTGAGATTGGAGGAATCACATAGAATAGATGTTGAAGAAGAGTTGAGCAGTTTTTATGCATGTATCAAGTTAAGTTATGATAATTTGACAAAGCAAGTATCCAAATCTCTCTTTTTATTATGCTCCATGTTTCCTGAAGATTGTGAGATTGGTGTGGAAGATTTGGTTCGGTACATGAAGGGACTTGGACCTGCTGCTGGAACTACAGGGACAATGGAGAAAGTGAGGAGAGAGATACAAGTGGCCATTTACTTTCTTAGAGATGCATATTTGTTGCAACCTAGTGGTCAAAGAGAATTTGTGAAAATGCATGATCTGGTCCGTGATGTGGCTTTGTGGATTGCATCCAAAGAGGGTAAAGCAATTAAGGTAGCTACTCAAACATTGGAAGTAGTAGATGAAGACATAAAAGATTTAGCTGCAATGTCCTTATGGGGCATGGAGAATCAGAATCTACCTTCTACTGATCAATTGCAGTGTTCAAAACTCAAGACTCTTCTACTTCATTCCACTGATGAATCTTCTTTGCAAGTGCCAAATGAGTATTTTGGAGGGATGCAAATGCTAGAAGTCTTGGGGATTGTAAAATATTACTATACATGGCGCAACTTGTATACATTGTGTAACTTAAGCTCATCATTGTCTACTTTGACCATACCAAAATCAATTGAGAGATTAACAATGTTGCGAAGTCTTTGTCTAAGAGGATATGAACTAGGTGATATCTCTTTATTGGCAAGCTTAACAGGACTTGAGATTCTTGATTTGCGTAGTTCATCTTTCAATGAATTGCCACATGGAATTGTAGCTTTGAAGAAGTTAAGACTACTTGACATATACACCTGCCGCATCAAGAAGAACAACCCTTATGAAGTGATAAGAAAGTGTATGCAACTAGAGGAATTGTATATATGGAGAATTGAAGATGATTCTTTATATATTGTCTCATTGCCAAGGTTGCAGAGGTATGTTATAGTATGTGACAAGTTCAGGGAAAACTGTAGATTTCTTATAGATGCTTATCTAGAAGACCATGTGCCATCAAGAGCTTTATGCATAGACCGGTTTGATGCCTCTGCTTTGATTCATGAATCATCATCAATCAAAGATTTGTTTCTGAGGGCAGAGCACCTTTACTTGGGGCATCTTCAAGGAGGTTGCAAAAATATCATCCCACAAATGGATCAAGGAGGCATGACTGAGTTGATTGGGCTAATACTTGAGTCTTGTTCTGAGATAGAGTGCCTCATTGATACTACTTCACATACCAATTTGCCAGCATTTTTTGAGTTGGTTACCCTAAAGTTGATATGGATGGATGGTCTTAAAGAAGTTATCTGTGATCCAACTTCCCAATGTTGTCTTGAAAAATTAGAAGACCTACAAATAGAGTATTGTGTACAATTGAATAGCATATCTTTTCCAAGGAAATCAAATATGTGCAATCTTAAGATCCTTAGATTACAGTGGTGCCCAATGCTAACATCATCACTCTTCACCCCTGCCATTGCTCGAAGCTTAGTTCTACTAGAGGAATTGAAATTATTTGATTGCAGCAAGTTGAAGCATATCATAGCAGAAGAACAAGAGGAAGATGGAAATTCTAGTAATCCAAGTCCTACCTTGAAAGTGTTCCCAAATCTAAGGATTCTTCATGTGCATGGATGTCATAGGTTAGAATCAATCTTTCCTGTCACATTTTCTCAAAGTCTAGAGAAATTGGAGAAGATAGCTATATGGTACAACTTTGGATTAAAGTATGTATTTGGCACACTCAATGACTACAAGCTCAGTGAGAGCGAGGCTAAACCCAACATCAACCTCCTTGCTTTAAGAACCATCTCACTTGTATCATTATCAAATTTGATTGACATTTGCCCCAGATATTGTCATCCAAGATCACCCAACTTGAAAGAGATAGAATACAGAGATTGTCCCCACCTGTCAACCAATGCAATGTGCAAGACTTTGATTAGTTCAGATATGCAACAAGGTCTTACACCTACAGAGGAAAAAATATTATTTCCTAAAAATGGAGAATCAATCCTAGCTTTGGAACGTCTTAGTATTGACCATTCCATGGTGGAAGGTATTTTCCAACTGCAAGTTGAAGGACAACAACCCTTGAACTCAAACTTGTCTCACTTATGTTTAAAGGATTTACCTGATTTGAGGCTCATTTGGAAGGGCCCAAAAGATCTCCTCAACCTTCACAGACTCAAGAGTCTAGTGCTAGTGGGATGCAAAAACTTGGAAACCATCTTCTACCCCACTATTGTTGGAAGCTTAGCAGAATTGACTGAACTGGTTATAAGCAAGTGTCAACAATTGGAGCAGATCATTAACTCAGATCACACAGATCAAGTTGGAAACCCATCTTCTCGTTCCAAATCAGTGTGCTTCCCTCTATTGTCCATTGTTCATGTCTTTCAGTGCAATAATTTGAGATGCCTTTTCTCTCATTCATTGCCTTCTTCATTTCCTGAGCTAGAATTTATTACAATAGAGGAGTGTTCCAAAATAGAACATATTTTCTATTTTAATCGCCATGTTGTTACATCTAATTATGATGATAAAGGTCAAGGACAAGGAGTAGGAAGGGTACCTGATGAAGACACACAACCATTAGTGCTTCCAAAATTGAGAGAGGTAAAACTTGTAAGTTTGCCTAACTTCACTGAATTTTTCCAAGGGCCTTATAAGTTGCAGCAGAATGTGAAGCATTACACAGTGAGGCATTGTCCTAAATATACCTCTGCTTGGCTGCATACTGATAACCAGGAGAAGGGTCAAATTTCCTCCACACAATCACAAACAATTGGGAAAGTCTCAAGTATAGGATTAGGATCAGATGCTTGTGTTGCTACCACCAGTGGTAGTGTCAGTGATCCTCAGATACAAGAGAGGGTGAGCAACTTGGAAAAATACTTAGAATCTGAGAGACAAAGACGAAGGTTGATGGAAACTGATTTGGAATCTGAGCGACAAAGGCAAAGGTTGATGGAGTTAGATTTGCAGGTTGAGAGGGAAAGACGAAGATTGATAGAATTGAAGCTGGAAGCTGAACAGGAAAGACGACGAATCATGGAAGAATCACTGTTTTCTGTCTTTCATCAAATGCTTGGAAGGGTCCCTCAACAGTTTGTTGGCTTGCTTTCCCAGAATCCTCTGGCACCAAATGAAGAAAGTGGAGATCAAGACATTCATGATGTATTGATACAATCCTCTTGA 4299 0.3866 MADVGLSIAAKLLEYLVEPLLHQARYVLCLNKIVRNLHEEKEKLILSQRNVKEHIKEAKRKTEIIEESVERWMNDVRTILEEVQKLEEKTEENNKCYRVPFHYFLSKEVASVTEKMMKLNNYKFEQFSRRTELPGMQYFSSKNFVYSKSTENAYNELMEALKDVNNHMIGFHGMGGSGKSTLVKEVGKKAQELHLFDKVVIVVVSHNPLLTKIQGEIADSLGLILREETVYGRAQRLSLSLQNERTLVILDDVWEKLDFEAIGIPPNCIVLLTTRGRDICVSMNCQVIVELSLLDEEEAWTLFKRCADIIDDSPYALKLKNVPRKIAKKCRRLPIAIVTMASMLRGKKFEEWELALLRLEESHRIDVEEELSSFYACIKLSYDNLTKQVSKSLFLLCSMFPEDCEIGVEDLVRYMKGLGPAAGTTGTMEKVRREIQVAIYFLRDAYLLQPSGQREFVKMHDLVRDVALWIASKEGKAIKVATQTLEVVDEDIKDLAAMSLWGMENQNLPSTDQLQCSKLKTLLLHSTDESSLQVPNEYFGGMQMLEVLGIVKYYYTWRNLYTLCNLSSSLSTLTIPKSIERLTMLRSLCLRGYELGDISLLASLTGLEILDLRSSSFNELPHGIVALKKLRLLDIYTCRIKKNNPYEVIRKCMQLEELYIWRIEDDSLYIVSLPRLQRYVIVCDKFRENCRFLIDAYLEDHVPSRALCIDRFDASALIHESSSIKDLFLRAEHLYLGHLQGGCKNIIPQMDQGGMTELIGLILESCSEIECLIDTTSHTNLPAFFELVTLKLIWMDGLKEVICDPTSQCCLEKLEDLQIEYCVQLNSISFPRKSNMCNLKILRLQWCPMLTSSLFTPAIARSLVLLEELKLFDCSKLKHIIAEEQEEDGNSSNPSPTLKVFPNLRILHVHGCHRLESIFPVTFSQSLEKLEKIAIWYNFGLKYVFGTLNDYKLSESEAKPNINLLALRTISLVSLSNLIDICPRYCHPRSPNLKEIEYRDCPHLSTNAMCKTLISSDMQQGLTPTEEKILFPKNGESILALERLSIDHSMVEGIFQLQVEGQQPLNSNLSHLCLKDLPDLRLIWKGPKDLLNLHRLKSLVLVGCKNLETIFYPTIVGSLAELTELVISKCQQLEQIINSDHTDQVGNPSSRSKSVCFPLLSIVHVFQCNNLRCLFSHSLPSSFPELEFITIEECSKIEHIFYFNRHVVTSNYDDKGQGQGVGRVPDEDTQPLVLPKLREVKLVSLPNFTEFFQGPYKLQQNVKHYTVRHCPKYTSAWLHTDNQEKGQISSTQSQTIGKVSSIGLGSDACVATTSGSVSDPQIQERVSNLEKYLESERQRRRLMETDLESERQRQRLMELDLQVERERRRLIELKLEAEQERRRIMEESLFSVFHQMLGRVPQQFVGLLSQNPLAPNEESGDQDIHDVLIQSS. 1433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00346 1432 PRINTS Disease resistance protein signature 168 183 - -
Seca7g00346 1432 PRINTS Disease resistance protein signature 240 254 - -
Seca7g00346 1432 PRINTS Disease resistance protein signature 330 344 - -
Seca7g00346 1432 PRINTS Disease resistance protein signature 602 618 - -
Seca7g00346 1432 Gene3D Ribonuclease Inhibitor 481 889 IPR032675 -
Seca7g00346 1432 SUPERFAMILY L domain-like 458 1137 - -
Seca7g00346 1432 Gene3D - 293 381 IPR042197 -
Seca7g00346 1432 Gene3D - 136 290 IPR027417 -
Seca7g00346 1432 Pfam NB-ARC domain 150 384 IPR002182 GO:0043531
Seca7g00346 1432 SMART AAA_5 165 293 IPR003593 GO:0016887
Seca7g00346 1432 Coils Coil 1333 1387 - -
Seca7g00346 1432 Coils Coil 147 167 - -
Seca7g00346 1432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 397 IPR027417 -
Seca7g00346 1432 SUPERFAMILY RNI-like 1040 1199 - -
Seca7g00346 1432 MobiDBLite consensus disorder prediction 1411 1432 - -
Seca7g00346 1432 Gene3D Ribonuclease Inhibitor 890 1021 IPR032675 -
Seca7g00346 1432 Gene3D Ribonuclease Inhibitor 1026 1205 IPR032675 -
Seca7g00346 1432 Coils Coil 55 93 - -
Seca7g00346 1432 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1039 1201 - -
Seca7g00346 1432 Gene3D - 382 468 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00346 Seca-Chr7 3540754 3548271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00346 154 486 WRKY Transcription Factor Family AT5G45050 26.912 8.93e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00346 - - mtr:11431977 2108.95