Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00335 ATGAGTGTAGTGGGGTTTGACATTGGAAACGAGAACTGTGTTATTGCTGTAGTGAAGCAACGTGGGGTTGATATTTTATTGAATGATGAATCCAAACGTGAAACCCCTGCTGTGGTCTGCTTTGGAGAGAAGCAAAGGTTTTTAGGGTCAGATGGTGCTGCTTCTGCTATGATGCACCCCAAGTCCACAATATCTCAAGTGAAGAGACTAATAGGCAAGAGATTTGCAGACCCTGATGTTCAAAATGACCTGAAAATGCTCCCTGTTGAAACTTCTGAAGGCCCAGATGGTGGCATTCTGATTCACTTAAAATACTTGAAGGAGACTCATACATTTAAACCGGTTCAAATAGTAGCAATGCTTTTTGCTCACTTGAAGACTATAGCCGAAAAAAATTTGGGGACCTCTGTTTCAGATTGTGTTATTGGGATTCCATCATACTTTACTGACTTGCAGAGACGGGCATATCTCAATGCAGCAACAATTGTTGGGTTGAAGCCTTTGAGGTTGATGCATGATTGCACTGCAACTGGTCTTGGTTATGGAGTTTACAAAACAGATTTTCCCAAGGCAGCTTCCATTTATGTTGCTTTTATTGACATAGGCCACTGTGATACTCAAGTCTCTATTGCAGCATTTCAGGCTGGGAAATTGAAGATACTTTCACATGCTTTTGACAGGAGCTTAGGGGGTAGAGACTTTGATGAGGTTCTATTTAGTCATTTTGCAGAAAAATTTAAGGAACAGTACAGCATTGATGTGTATTCTAATGCCAGGGCATGTCTTAGGCTGCGGGCAGCATGTGAGAAGTTGAAGAAAGTTTTGAGTGCAAATGCAGAGGCACCTCTGAACATTGAGTGTTTGATGGATGAAAAAGATGTTAATGGATTTATCAAGAGGGAAGAATTTGAGAATCTGGTATCAGGATTATTGGAGAGAATTCGTGTTCCTTGCAACAAAGCATTAGCTGATGCAGGCTTGACTGTAGAAAAGATTTATTCTGTTGAGTTAGTTGGTTCAGGTTCAAGGGTTCCAGCTATAACTAGATTATTAACTTCTCTATTTAAGAGAGAACCCAGACGGACACTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTACAGTGTGCAATGCTCAGTCCTATTTTCCGCGTTAGAGAATATGAGGTCCTGGATTCTTTTCCTTTTTCCATTGGACTTTCAGCAGATGGAGGTCTAATTTGTGCAGGAACAAATGGTGTACTTTTCCCAAGAGGCCAACCCATTCCAAGCGCTAAAATTCTAACATTTCAATGCAGTAATTTGCTCCATTTGGAAGCATTCTATGCTAATCCAGATGAAATACCACATGGGACATCTCCTAAAATTAGTTGCTTCACATTCACCACTTCTATTCAGATTGGTCCTTTCCATGGATCCCATGGAAGTAAGATGAGAGTTAAAGTTAAAGTTAAAGTTCGACTAAATTTGCATGGCATTGTCAGTATTGAATCAGCTACATTGATCGAGGATCATTTGGATGATTCAGTTACAACAGGTGATAATTCAAATTCTAAAGCAATGGATGTTGAACCCGTTTCTGAGACAGTTGAAAATGTCATTGAAGATAGTATCAATAAAAAGTGTGAATCTACGCATCGTTCTTCTGATGGTACAAGAAAAGATAAAGCTAACAGAAGGCTTCATGTACCAGTGAGTGAGAATATCTATGGTGGAATGACCAAGGCTGAGATCTTGGAATCTCAAGAAAAGGAACTCCAGTTAACCCAGCAGGATAGAACAATGGAGCTAACCAAAGACAAGAGGAATTCCTTGGAGTCTTATGTCTATGATATGAGGAGTAAGCTCTTCAACATATATCGGAGTTATGCAAGTGAACAAGAGAGGGATGGAATATCTAGGAGCCTGCAAGAGACTGAGGATTGGCTTTATGATGATGGTGATGATGAAACTTTCCATGCTTATTCTGCAAAACTAGAAGATCTAAAACAGCTGGTGGATCCAATTGAGAATAGGTATAAAGATGAAGAAGCAAGAGCGCAGGCTACGAGAGATTTGTTAAGTTGCATCGTAGAGCATCGCATGTCTGCAGATTCCCTTCCACCCGAAAATAAAGAGCAGATCATCAATGAATGCAATAAAGCAGAGCAGTGGCTAAGAGAGAAGATGCAGCAACAAGATACTTTGCCTAAGAGCTCTGATCCAGTATTTTGGTCAAGTGATATCAAGAGCAAGACAGAGGATTTGAAGTTAGGATGCCAACGGATATTGGGATCCAAGGATTCTCCAATTACAGAAGACAAAGGTGAAGACAAGCAGAATACTTCTAATCATCAATGA 2343 0.4033 MSVVGFDIGNENCVIAVVKQRGVDILLNDESKRETPAVVCFGEKQRFLGSDGAASAMMHPKSTISQVKRLIGKRFADPDVQNDLKMLPVETSEGPDGGILIHLKYLKETHTFKPVQIVAMLFAHLKTIAEKNLGTSVSDCVIGIPSYFTDLQRRAYLNAATIVGLKPLRLMHDCTATGLGYGVYKTDFPKAASIYVAFIDIGHCDTQVSIAAFQAGKLKILSHAFDRSLGGRDFDEVLFSHFAEKFKEQYSIDVYSNARACLRLRAACEKLKKVLSANAEAPLNIECLMDEKDVNGFIKREEFENLVSGLLERIRVPCNKALADAGLTVEKIYSVELVGSGSRVPAITRLLTSLFKREPRRTLNASECVARGCALQCAMLSPIFRVREYEVLDSFPFSIGLSADGGLICAGTNGVLFPRGQPIPSAKILTFQCSNLLHLEAFYANPDEIPHGTSPKISCFTFTTSIQIGPFHGSHGSKMRVKVKVKVRLNLHGIVSIESATLIEDHLDDSVTTGDNSNSKAMDVEPVSETVENVIEDSINKKCESTHRSSDGTRKDKANRRLHVPVSENIYGGMTKAEILESQEKELQLTQQDRTMELTKDKRNSLESYVYDMRSKLFNIYRSYASEQERDGISRSLQETEDWLYDDGDDETFHAYSAKLEDLKQLVDPIENRYKDEEARAQATRDLLSCIVEHRMSADSLPPENKEQIINECNKAEQWLREKMQQQDTLPKSSDPVFWSSDIKSKTEDLKLGCQRILGSKDSPITEDKGEDKQNTSNHQ. 781
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00335 780 FunFam Heat shock 70 kDa protein 4 574 684 - -
Seca7g00335 780 Coils Coil 660 680 - -
Seca7g00335 780 Gene3D - 574 686 IPR029048 -
Seca7g00335 780 FunFam Heat shock 70 kDa protein 4 38 113 - -
Seca7g00335 780 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 607 IPR029047 -
Seca7g00335 780 PANTHER HSC70CB, ISOFORM G-RELATED 1 771 - -
Seca7g00335 780 FunFam Heat shock 70 kDa protein 4 1 79 - -
Seca7g00335 780 FunFam Heat shock 70 kDa protein 4 230 313 - -
Seca7g00335 780 Gene3D - 186 360 - -
Seca7g00335 780 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 546 IPR029047 -
Seca7g00335 780 FunFam Heat shock 70 kDa protein 4 104 198 - -
Seca7g00335 780 MobiDBLite consensus disorder prediction 762 780 - -
Seca7g00335 780 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 577 674 IPR029048 -
Seca7g00335 780 MobiDBLite consensus disorder prediction 756 780 - -
Seca7g00335 780 Gene3D - 38 113 - -
Seca7g00335 780 Gene3D - 5 374 - -
Seca7g00335 780 Pfam Hsp70 protein 3 674 IPR013126 GO:0005524|GO:0140662
Seca7g00335 780 CDD HSPA4_like_NDB 2 381 - -
Seca7g00335 780 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Seca7g00335 780 Gene3D Actin; Chain A, domain 4 230 313 - -
Seca7g00335 780 PRINTS 70kDa heat shock protein signature 140 160 - -
Seca7g00335 780 PRINTS 70kDa heat shock protein signature 363 383 - -
Seca7g00335 780 PRINTS 70kDa heat shock protein signature 2 15 - -
Seca7g00335 780 PRINTS 70kDa heat shock protein signature 332 348 - -
Seca7g00335 780 PRINTS 70kDa heat shock protein signature 388 407 - -
Seca7g00335 780 PRINTS 70kDa heat shock protein signature 30 42 - -
Seca7g00335 780 SUPERFAMILY Actin-like ATPase domain 196 380 IPR043129 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca7g00335 Seca-Chr7 3419235 3426049 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00335 4 431 Calmodulin-binding Proteins AT1G16030 34.339 2.26e-79 266
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00335 K09489 - gmx:100795914 1249.96