Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00331 ATGCAAAACGGTAACCTCCAAGACGCGCTCTTGCGTCGCAAGTGCCCTGAATTCTTCGATTGGAACAAGCGCTTCGCCATTCCGTTGGACATAGCTAAAGGAATTCACTACCTTCACTCTTGTGACCCTCCAATTATCCATGGAGACATAAAACCTAGTAACATCTTGCTGGATCGTGATTTCTCAGTGAAAATTGGGGATTTTGGACTTGCCAGTTTGAAATTGGAACCACCCCAGTGGAGAGTGTTCATACTGGTTTTTTTGGAAGAGGGTAATTTGGGTATGGAGCAATCCTCTGCTTCGCCTAAGACAATGGCGATAACCGCCTCGCCGGAGATGGGTTTGGCCATTGCTGCATCGCCGAGGTTTGATAAGGCTAGTGTGCAGAGTGAGAAGGATGTTGATGTTGTTGGGGGTTTTAAGAGGAATGGTAAAGGGCTAAAGAGTAATTCAGTGAGGGATTGGTGGTGGAAACATAACAATGAGGTTGTGGCTTCGGGTTCAAGTTCAACTCCGGTTGGTGAAGCTAAGAAGGTTAAGGATTATGTGATGGAGTGGCTTGGGAGGGAGGTGAATAAGGAAGGGACCAATAAGAGTGAATTGGTAGGAGGGAAACCAGAGAAGAAGAGCAAGAAGCAAGAATTGGAATGGTGGGAATCCATGGATGAGGAAAATGTTGAGGGAAAGGGATGGGGAGGGGTGGGTGGTATGGGCGAAGCTTGGGAGGGGACTAGTGATGATCAATATGAGTGA 753 0.4728 MQNGNLQDALLRRKCPEFFDWNKRFAIPLDIAKGIHYLHSCDPPIIHGDIKPSNILLDRDFSVKIGDFGLASLKLEPPQWRVFILVFLEEGNLGMEQSSASPKTMAITASPEMGLAIAASPRFDKASVQSEKDVDVVGGFKRNGKGLKSNSVRDWWWKHNNEVVASGSSSTPVGEAKKVKDYVMEWLGREVNKEGTNKSELVGGKPEKKSKKQELEWWESMDEENVEGKGWGGVGGMGEAWEGTSDDQYE. 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00331 250 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Seca7g00331 250 MobiDBLite consensus disorder prediction 195 214 - -
Seca7g00331 250 MobiDBLite consensus disorder prediction 222 250 - -
Seca7g00331 250 Pfam Protein kinase domain 2 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00331 250 PANTHER OS07G0586332 PROTEIN 1 227 IPR044576 -
Seca7g00331 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Seca7g00331 250 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00331 250 SUPERFAMILY Protein kinase-like (PK-like) 1 79 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00331 Seca-Chr7 3396662 3399093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00331 1 116 Receptor kinase-like Gene Family AT5G35380 38.971 7.49e-19 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Seca7g00331 Pkinase 3.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00331 - - lja:Lj2g3v0473820.1 280.411