Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00328 ATGGAAGGTGTTGTTGTGAGAAGAGTCATTCCTTCGGATAATAGTTGCCTCTTTAATGCAGTTGGCTATGTTATGGATCGTGACCGAAACAAAGCTGCTGACTTGAGACAGGTTATAGCTGCAACAGTGGCAAGTGATCCTGAGAAATATTCTGAAGCATTTCTTGGGAAGCCAAATGCAGAGTATTGTAACTGGATTCTTGACTCAGAGAAGTGGGGAGCTATATTCCTTTGTGAAGGTGCAATTGAACTTTCAATATTAGCAGATTATTATGGACGTGAAATTGCAGCATATGATATCCAGACCACACGATGTGATTTGTATGGTCAGGATCGTAACTACTCTGAAAGGGTGATGCTGATTTATGATGGTCTCCACTATGATGCATTAGCTATGTCTCCCGTTGAGGAAGCTCCTGAGGAGTTTGATCAGACCATATTTGCTGTACAGAATGACAGAAGCATTGGACCCGTCGAGGGGCTTGCTTTAAATTTTGTTAAAGACGAACAGAGGAAACGGAGATTCACTGACACTGCCAACTTCACTCTGCGCTGTGGGGTATGCCAAATTGGAGTAGTTGGTCAGAAGGAAGCAATGGAGCATGCGCAAGCAACTGGCCATGTTAACTTCCAAGAATATAGATAA 645 0.4295 MEGVVVRRVIPSDNSCLFNAVGYVMDRDRNKAADLRQVIAATVASDPEKYSEAFLGKPNAEYCNWILDSEKWGAIFLCEGAIELSILADYYGREIAAYDIQTTRCDLYGQDRNYSERVMLIYDGLHYDALAMSPVEEAPEEFDQTIFAVQNDRSIGPVEGLALNFVKDEQRKRRFTDTANFTLRCGVCQIGVVGQKEAMEHAQATGHVNFQEYR. 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00328 214 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 5 212 - -
Seca7g00328 214 FunFam ubiquitin thioesterase OTU1 1 179 - -
Seca7g00328 214 Gene3D - 1 179 - -
Seca7g00328 214 ProSiteProfiles OTU domain profile. 5 133 IPR003323 -
Seca7g00328 214 CDD OTU_plant_OTU1_2-like 3 172 - -
Seca7g00328 214 SUPERFAMILY Cysteine proteinases 8 130 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00328 Seca-Chr7 3357659 3362309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00328 1 214 C2H2 Transcription Factor Family AT1G50670 78.972 5.27e-128 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00328 K13719 - gmx:100499809 387.882