Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00322 ATGCCCTCAGCTCAAGATCCATTCTACGTTGTCAAGGAGGAGGTTCAAGAATCTATTGATAAGTTGCAATCTACTTTTCACCAATGGGAAAAAACTTCTGATACTGGTGAGCGAGAGCATCTTGCAAAGGAAGTTCTTGCTGGTTGTGAAAGTATTGAATGGCAGGTGGATGAATTGGACAAAGCAATTTCTGTAGCATCTAGAGAAACTTCTTGGTATGGCATTGATGAAGTGGAGGTTGAAAATCGGAGGAGGTGGACCAGCAGTGCTCGCACTCAGGTGCGCACAACGAAGCAATCAGTGGAAGCTGGGAAGGGCTCAAATACAACAAATCATGCAAGTCCAAATGGGATGCACAGGGAATTAATGAGGCTTCCTGATTCTCATCAAACTGCATCCAACCAATATGCTGCCCGGGATAATGATGATTTCATAGAATCAGAATCAGATAGGCAGATGCTTCTTATAAAGTACTTTTTTCCCCTCCCTTTCAATCTGTCTCTTCTATGTGGCATTGAACTAAGTAGTTGTCTTATGTCCTATTTTTAA 549 0.4226 MPSAQDPFYVVKEEVQESIDKLQSTFHQWEKTSDTGEREHLAKEVLAGCESIEWQVDELDKAISVASRETSWYGIDEVEVENRRRWTSSARTQVRTTKQSVEAGKGSNTTNHASPNGMHRELMRLPDSHQTASNQYAARDNDDFIESESDRQMLLIKYFFPLPFNLSLLCGIELSSCLMSYF. 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00322 182 CDD SNARE_NTD_AtSYP61-like 5 102 - -
Seca7g00322 182 Gene3D - 2 104 - -
Seca7g00322 182 MobiDBLite consensus disorder prediction 89 119 - -
Seca7g00322 182 FunFam Syntaxin 10 3 104 - -
Seca7g00322 182 Pfam Syntaxin 6, N-terminal 6 98 IPR015260 GO:0016020|GO:0048193
Seca7g00322 182 SUPERFAMILY t-snare proteins 5 101 IPR010989 GO:0016020|GO:0016192
Seca7g00322 182 Coils Coil 12 32 - -
Seca7g00322 182 MobiDBLite consensus disorder prediction 89 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00322 Seca-Chr7 3301452 3305686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00322 55 157 SNARE and Associated Proteins AT1G28490 60.577 1.26e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00322 K08500 - gmx:100793612 263.848