Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00317 ATGGGGGACGAGTCGCCGAGGAATAAAGTAAAGTTCTTGTGTAGCTACGGCGGAAAAGTTCTCCCACGGCCCTCCGATGGAGTCCTCAAGTACGTGGGCGGCGAGACTCGTGTCATTTGTGTCCCTCGTGACATCAATTTCTCCGAGGTTATGAAGAAGGTGAGTGGCATGACTGAATATGATGTAGTCCTCAAATACCAGATGGTTCCTGAAGATTTAGATGCTTTGGTATCGGTGAAAACAGATGAAGATCTGAAACACATGATTGAAGAACATGATCGACATGAAAGTGCAGGAACACCATTGCTTCGTGCTTTCCTCTTCCCTTTGAAGCCAATTTCAGTTGACAACCAACATCAACAACATCAAATTCAAGTTCTTCAACCACCCCCATGTGAACCATATTTGTTAGAACAACGTTATATTGATGTTGTCAATGGCATCATACGTACAAGTCCAAGGGCAAAGCAGAACACGATTTGCTCTGCTTGTTCTTCTCCAAAATCCAACTCCCCAGATGGCCATACTGGTGAATCGCCATTATTCCAGTCTTCCCAACCTGGGCGCCTTTCAACAATGAGTAGAGTGCGAAGCTCTCCTAGCCTCACCAACCTTAACAATAACAACCCACATGATCATGGTGGTCATCATCATTACCCTCTTGCTTATCCATCATCATCATCATCATCATCATCATATAGACCCCCACAAGATCCTCAATTAGGACTAGGAGGAGGGATTGGGATTGGGATGGTAAGGCCACCACCCCAAGTTATGACAGATATTGGTAGAGGGGGTTTTAACTATTATTATTCAACACCCAGACCCCATAAAGGTTATAATGCTCACCAAGATGACTCTGTACCTTATGGTCATGTCATGTTTGAGAGAGTTCATAGTGTGCCTCGGAGTCCTCGAAAATCTATATGGGAGTAG 936 0.4466 MGDESPRNKVKFLCSYGGKVLPRPSDGVLKYVGGETRVICVPRDINFSEVMKKVSGMTEYDVVLKYQMVPEDLDALVSVKTDEDLKHMIEEHDRHESAGTPLLRAFLFPLKPISVDNQHQQHQIQVLQPPPCEPYLLEQRYIDVVNGIIRTSPRAKQNTICSACSSPKSNSPDGHTGESPLFQSSQPGRLSTMSRVRSSPSLTNLNNNNPHDHGGHHHYPLAYPSSSSSSSSYRPPQDPQLGLGGGIGIGMVRPPPQVMTDIGRGGFNYYYSTPRPHKGYNAHQDDSVPYGHVMFERVHSVPRSPRKSIWE. 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00317 311 MobiDBLite consensus disorder prediction 222 237 - -
Seca7g00317 311 Gene3D - 30 108 - -
Seca7g00317 311 PANTHER OS05G0427100 PROTEIN-RELATED 3 239 - -
Seca7g00317 311 Pfam PB1 domain 29 108 IPR000270 GO:0005515
Seca7g00317 311 CDD PB1_UP2 13 108 - -
Seca7g00317 311 MobiDBLite consensus disorder prediction 156 210 - -
Seca7g00317 311 SUPERFAMILY CAD & PB1 domains 25 116 - -
Seca7g00317 311 SMART PB1_new 24 110 IPR000270 GO:0005515
Seca7g00317 311 MobiDBLite consensus disorder prediction 156 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00317 Seca-Chr7 3267337 3268592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00317 3 170 MAP Kinase Kinase Kinase AT3G46920 39.181 6.36e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00317 - - tpra:123910761 304.293