Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00292 ATGGCGAATTTGCCCCAATCCTTCTCCATAACCGGCGCGTCGTTTGCAGCTGCTTCCGCCATTCCATCCAACAACGCCGCCAATCGCAAGATGGCTTCCGCGGAGCAACTTGTTCTCGAACTCAGCAACCCCGATCTTCGAGAAAACGCTCTTCTTGAACTTTCCAAGAAGAGAGAGTTGTTTCAGGATCTTGCACCATTGTTGTGGAATTCTTTTGGTACTATTGCAGCACTTTTACAGGAAATAGTTTCAATATACCCTGTTATTTCACCACCGAATCTTACTCCAGCACAATCAAATCGAGTATGCAATGCTCTTGCCCTGCTTCAGTGTGTGGCATCTCACCCTGAGACAAGGACGCAATTCCTCAATGCTCACATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTATTTGAGGCTTACCAGTCTCGGTGTTATTGGTGCCTTGGTGAAGGTTGATGACACAGAAGTTATAGCCTTCCTTCTTTCAACTGAGATAATTCCGCTGTGCCTGCGCACCATGGAAATCGGCAGCGAATTGTCAAAAACTGTTGCAACATTTATACTTCAAAGAATTGTGTTGGACGATATTGGTTTGGATTATGTTTGTGCTACAGCAGAGCGCTTTTTTGCAGTGGGTCGAGTTTTGGCGTGCATGATAGCAATTCTTGCTGAGCAACCTTCAACTCGTCTTTTGAAGCATATTATTCGATGTTATCTTCGTCTGTCAGATAATCGAAGGGCTTGCGATGCATTAAGAAGCTGTCTTCCGGATATGTTAAGAGATGCCACTTTCAGTAGTTGCCTTCATGAAGATCCAACGACTAGGAAGTGGCTACAACAGTTGCTTCACAATGTTGGAATGAATCGGCTTCCTTCACTACAAGCTGGAGGAGGATTTGATCATATGATGGTGTCGTGA 948 0.4451 MANLPQSFSITGASFAAASAIPSNNAANRKMASAEQLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVISPPNLTPAQSNRVCNALALLQCVASHPETRTQFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVIAFLLSTEIIPLCLRTMEIGSELSKTVATFILQRIVLDDIGLDYVCATAERFFAVGRVLACMIAILAEQPSTRLLKHIIRCYLRLSDNRRACDALRSCLPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGMNRLPSLQAGGGFDHMMVS. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00292 315 Gene3D - 26 296 IPR011989 -
Seca7g00292 315 PANTHER UNCHARACTERIZED 28 298 IPR007216 GO:0006402|GO:0030014
Seca7g00292 315 Pfam Cell differentiation family, Rcd1-like 37 295 - -
Seca7g00292 315 FunFam Cell differentiation protein RCD1 27 298 - -
Seca7g00292 315 SUPERFAMILY ARM repeat 39 295 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00292 Seca-Chr7 3075167 3080759 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Seca7g00292 Rcd1 1e-126 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00292 K12606 - gmx:100784529 535.028