Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00286 ATGTCGGCGTCAGAGATTCTCCGGGAACTGGAATCCCTGAAGCACCAAAAGAGCTCAATCGAACACAAAATCTCTGCGCTTGAAGCTCAACTGAAAGAGATTAATCTCCAAAACGACGCCGTACCCAATGGCTCTTCATCATACCCCACTAACGGATTGGCTCCTCACATGATCCACAGATACAGTCGTCACCTTGTCCTTCCTTCCTTTGGTGTTCAAGGGCAGGCAAATCTCTTGAAGTCATCAATTTTAGTTGTGGGAGCTGGAGGATTGGGTGCTCCTGCCTTGTTATACTTTGCAGCTTCTGGTGTTGGTCGCTTGGGTATTGTTGATCATGACAAGGTTGAGCTGAATAATATGCATAGACAGATTATCCACACGGAAGCATTTATTGGTCAGCCAAAAGTGAAATCTGCTGCTGCTGCTTGTCGCTCGGTCAACTCCTCTATTCAAATTGTGGAACATGAAGAAGCTTTGCGGACTTCCAATGCTTTGGAAATTCTCAGCAAATATGATATAATAGTAGATGCAACAGATAATGCTCCCACCCGGTATATGATCAGTGATTGCTGTGTGGTACTAGGAAAGCCTCTTGTATCAGGTGCTGCACTGGGATTGGAAGGGCAGCTTACTGTCTACAATTACAATGGTGGTCCTTGCTATCGATGCCTCTTTCCAACTCCACCACCTAGAACAGCGTGCCAAAGTTGTGCTGATGGTGGAGTTCTAGGAGTAGTTCCTGGTATAATTGGCTGTCTCGAAGCTCTTGAGGCTATAAAGATTGCAGCTTCTGTTGGTGAACCACTCTCAGGAAGGATGCTTCTCTTTGATGCATTGTCTGGACGGATTCGTGTTATCAAAATTAGAGGAAGGTCTATGCAATGTGAAGCTTGTGGAGAAAATGCAAAATTTACTCAGCAGTACTTCCGAGAATTTGATTATGAGAAGTTCACTCAGACTCCCTTATGTGTGCCTCCTTTGAAGTTAAATCTACTTCCCAGTGAATCAAGAATCAGCAGCAAGGAGTACAGTGAAGTAATTCTTAACAAGGAACCACATGTCCTTGTTGACGTTAGACCAGCTCACCATTTCAAGATTGTATCTCTCCCCAATTCCCTGAACATTCCACTCTCAACTTTAGAGGCTAGGTTGCCTGAAATATCATCAGCTTTGAAGAAAGAGGAAGAGGAAAGAGGTAGTGCACAATTGTATGTAGTATGCAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAGTGCCTTGAGAAAATGGGTTTCACTTCTGCCAAGGATATTGTTGGGGGCTTAGAGGCTTGGGCTCACAATGTGGATCCTAACTTCCCTACATATTAG 1350 0.4437 MSASEILRELESLKHQKSSIEHKISALEAQLKEINLQNDAVPNGSSSYPTNGLAPHMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAASGVGRLGIVDHDKVELNNMHRQIIHTEAFIGQPKVKSAAAACRSVNSSIQIVEHEEALRTSNALEILSKYDIIVDATDNAPTRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPRTACQSCADGGVLGVVPGIIGCLEALEAIKIAASVGEPLSGRMLLFDALSGRIRVIKIRGRSMQCEACGENAKFTQQYFREFDYEKFTQTPLCVPPLKLNLLPSESRISSKEYSEVILNKEPHVLVDVRPAHHFKIVSLPNSLNIPLSTLEARLPEISSALKKEEEERGSAQLYVVCRRGNDSQRAVQCLEKMGFTSAKDIVGGLEAWAHNVDPNFPTY. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00286 449 CDD RHOD_ThiF 329 449 - -
Seca7g00286 449 CDD ThiF_MoeB_HesA_family 60 288 - -
Seca7g00286 449 Gene3D - 336 449 IPR036873 -
Seca7g00286 449 ProSiteProfiles Rhodanese domain profile. 349 447 IPR001763 -
Seca7g00286 449 SMART rhod_4 339 444 IPR001763 -
Seca7g00286 449 Pfam Rhodanese-like domain 346 439 IPR001763 -
Seca7g00286 449 Coils Coil 3 37 - -
Seca7g00286 449 Coils Coil 377 397 - -
Seca7g00286 449 FunFam Adenylyltransferase and sulfurtransferase MOCS3 54 303 - -
Seca7g00286 449 Pfam ThiF family 61 296 IPR000594 -
Seca7g00286 449 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 27 449 IPR028885 GO:0002143|GO:0004792|GO:0005829
Seca7g00286 449 Gene3D - 56 304 - -
Seca7g00286 449 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 57 416 IPR035985 GO:0008641
Seca7g00286 449 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 57 312 IPR045886 -
Seca7g00286 449 FunFam Adenylyltransferase and sulfurtransferase MOCS3 336 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00286 Seca-Chr7 3014613 3019451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00286 99 449 Sulfurtransferasese or Rhodanese AT5G55130 72.269 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00286 K11996 - gmx:100814736 782.711