Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00273 ATGAGCTTGCTTCCTCAACCAATGATTTTCTTTAAAATCTTATTTATTTGCCTCTCTCTGTGTTTTGGTAAAGCCATGGATTGTGGTGGGAAGCAGGTTGCAAATACCATCACTGTTGATCAACATGGCAAAGGAGAATTCAACACGATTCAAGCTGCCATTGATTCTATAAAGAGCCCAAATGATCAATGGATTAAGATTCAAGTAAACCCCGGCACATATGTGGAAAAGGTTTCTATTCCCAAAGAGAAGCCATGCATCATTTTGGAAGGAGATAATAGGCAGAACACAATCATTACTTACGGTGATCATCAATCAATATCAAACTTCAGTGCTACATTCAGTTCATCTCCACCTAATGTGGTTGTAAGTGGCATTACTTTTAAGAACTCATTTAATCTGGCACAATGGTTGAAAAAGTATAAGCACACAAATTATGGAATTGAAATAGCAGTGGCAGCTGGTGTATCTGGAGACAAATCTGCCTTCTTCAGTTGTAGTTTCATGGGTTATCAAGACACACTGCGTGATTCAATTGGACGCCATTACTTTAAAGATTGCTACATTCAAGGTGAAATAGACTTCATTTTTGGTTCTGGCCAATCCTATTATGAGAATTGTGCAATCAATGCCACGCAAGGGAATTCTTCACCTCCGGGTTTTGTTACAGCCCAAGGTAGGAAAACACCAAATGAAACAAATGGTTTTGTTTTTGAGGGAGGTTCCATTAATGGGAATGGTAAAGTGGATCTAGGAAGAGCATGGGGTCCTTACTCAAGAGTTATATTTCATAGAACAATCTTTTCTTCAGTGGTAACCCCTAAAGGATGGAATGCTTGGAGCTTCACAGGCAACGAGAGAAACTTCATTTATGCTGAAGTTAATTGCACTGGAAAAGGGAGCAATACTTCAGAGCGTCCCCCTTGGGTGAAGAAGGATCTGAGTCCATCAGAGCTAAATGAATATTCTTTATCATCTTTCATCAACAAAGATGGTTGGCTTGCCAACATACCAACTATGTTCTTGTAA 1029 0.3926 MSLLPQPMIFFKILFICLSLCFGKAMDCGGKQVANTITVDQHGKGEFNTIQAAIDSIKSPNDQWIKIQVNPGTYVEKVSIPKEKPCIILEGDNRQNTIITYGDHQSISNFSATFSSSPPNVVVSGITFKNSFNLAQWLKKYKHTNYGIEIAVAAGVSGDKSAFFSCSFMGYQDTLRDSIGRHYFKDCYIQGEIDFIFGSGQSYYENCAINATQGNSSPPGFVTAQGRKTPNETNGFVFEGGSINGNGKVDLGRAWGPYSRVIFHRTIFSSVVTPKGWNAWSFTGNERNFIYAEVNCTGKGSNTSERPPWVKKDLSPSELNEYSLSSFINKDGWLANIPTMFL. 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00273 342 FunFam Pectinesterase 31 338 - -
Seca7g00273 342 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 335 - -
Seca7g00273 342 Gene3D - 30 341 IPR012334 -
Seca7g00273 342 SUPERFAMILY Pectin lyase-like 33 338 IPR011050 -
Seca7g00273 342 Pfam Pectinesterase 37 330 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00273 Seca-Chr7 2892466 2895664 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00273 10 286 Carbohydrate Esterase AT2G19150 45.907 3.74e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00273 - - tpra:123922273 408.683