Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00244 ATGAAACTAGGAATCTCTCTCTCTCTCTCTCTCTCTCCCCTCACCCCACACCCCACCTTCCTATATATACTTTATTTTTGGTACATACCTTCCTATATATACTTTAAAGCACCTTTGTCTTGCTCCTTACATTTTCATCAATATACTACTTTCTTCTTACATTCTCACCAATTTCACAAAATGCCAGACCAATACCTTAAAGAACCTCGTCTTGTAGCCAGGAAGTTCTTAGCCAAACCTCAACATGAAGGTGTTGGGGCAGTTGTTAGAAGAAGCATAGGAAGATTTGAGCTCAAGTACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTTGCTGCTCCTGCTGGGTTTCCTGATCATCCACATAGAGGCTTTGAGACAGTCACATACATGTTGCAGGGAGCTGTAACGCATGAAGACTTTGAAGGACATAAGGGAACTATTGAAGCTGGTGACTTGCAGTGGATGACTGCAGGGAGAGGAATTGTTCACTCAGAAATGCCTGCTTCTCAAGGAACCCAAAAGGGTCTTCAGCTGTGGATCAACCTTGCTTCACAACATAAAATGATTGAACCAAGGTATCAAGAAATGTTGAGCAAGGACATAGCAGAAGCTATGAGGGATGGTATCAAGGTTAGAGTTATAGCAGGGGAAGCACTTGGGATAAAGTCTCCAATCTACACAAGGACTCCAACCATGTACTTGGACTTTTCTCTTAAACCAGGGGCACACTTACAACAATTTATACCAAAATCATGGAATGCTTTTGTGTACATCTTGGAAGGAGAGGGTGTGTTTGGAAACCAAAAATCTCAACCTACAACACCTCACCATATTCTTCTTCTTGGTCCTGGGGATGGACTAGAGGCATGGAACAAATCTTCTAAGCTACTTAGGTTCATTTTGGTTGGAGGGGAACCATTGGGTGAACCTGTGGTGCAATTTGGACCCTTTGTGATGAATACTCAAGAAGAGATTGACCAAACCATTGATGATTTTGAGAACTATGCCAATGGATTTGAGAAAGCAAGACACTGGAGGTCTGAGAGTGCAATTAGTCTTGATTTTTAA 1074 0.419 MKLGISLSLSLSPLTPHPTFLYILYFWYIPSYIYFKAPLSCSLHFHQYTTFFLHSHQFHKMPDQYLKEPRLVARKFLAKPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVAAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPASQGTQKGLQLWINLASQHKMIEPRYQEMLSKDIAEAMRDGIKVRVIAGEALGIKSPIYTRTPTMYLDFSLKPGAHLQQFIPKSWNAFVYILEGEGVFGNQKSQPTTPHHILLLGPGDGLEAWNKSSKLLRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENYANGFEKARHWRSESAISLDF. 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00244 357 FunFam pirin 83 220 - -
Seca7g00244 357 PANTHER PIRIN-RELATED 66 351 IPR012093 -
Seca7g00244 357 SUPERFAMILY RmlC-like cupins 70 349 IPR011051 -
Seca7g00244 357 Pfam Pirin C-terminal cupin domain 235 338 IPR008778 -
Seca7g00244 357 CDD cupin_pirin_N 87 184 - -
Seca7g00244 357 Gene3D Jelly Rolls 204 309 IPR014710 -
Seca7g00244 357 Gene3D Jelly Rolls 83 335 IPR014710 -
Seca7g00244 357 CDD cupin_pirin_C 232 308 - -
Seca7g00244 357 Pfam Pirin 89 182 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00244 Seca-Chr7 2677811 2680954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00244 69 345 Calmodulin-binding Proteins AT3G59220 60.215 3.55e-126 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00244 K06911 - gmx:100790637 575.474