Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00237 ATGCAGGACACAAGAGATTTTGCATTGATTCTAAGGAGTCTGGTTTGTTTTTCTGTCCTTGCTTTCTTTACCAAACTCTGTACAGGAGGTGAGTTATCAGAGTCTGAGCCTTTCTTCAATTTCCTAAAAGCTGTTGATCCCAATAATGTGCTTAACATTACTTGGATTGGTTCAACATCACATCCCTGCTTGGTCAAGTTGAATGGTGTAAGATGTAACTCAAATGTTACCAATGTTGCAGGAATAAGGCTTGAAAAATTGAACCTTAGTGGCATAATTGATGCAGATTCCTTATGCAGGCTCCAAAAGCTGAGAGTGGTGAGTTTAGCTAAGAATAACATCAGAGGAACTATTCCACACTCAATTTTGCATTGTACAAGGTTGGTGCATTTAAATCTAACTAGCAATCAATTGAGTGGGGGGTTACCAAAGTCTCTAACAAAATTGAAATATCTTAAGAACTTGGACATATCTAACAACAATTTTTCTGGTATGATCCCTAGTAAACAAGAATATAGGCATCTCTTAACTTATTATGTTACTCCAATTAAGTTAGAAAGCAATAGTACTAGAAAGTGGCAAGAGGAAAGTGATGCAAATACAACACAATCAACACCAGATTCTTCAAGCAACAATACATCTGGTCATGACAAGAAACCATGGTATCTCAAAGGTGAAGTCTTGGTGGGGATAGCTCTGGGAATTGGATTGCTTTTGTCATCAATTTACTTTGTGATGAAGGGGTCACCTAAGTTAATTGAAGAGATGCAAGTAGGGAAAAGCCAACGTGTGTCTCCCCTAAACAAGTCTACAAGTGAGGTTCAAGAGGAGAAACTAAAAGAAGGAGATTCAGAACTTGTGTTCTTTGTTGAACACCATGAAAGATTCACATTAGAGGACCTACTTAGAGCAAAAGCTGATTTGCAAAGTGAAAGCTTTTGTAGCAGCCTTTATAAGGTGTCACTTGAGAATAGTGTTCACTATGCTGTCAAAAGATTAAAGAATGTGCAGGTATCCTCTGATGAATTTGGTGAAACATTGAAGCAGATAAGTGACTTGAAACATCCAAATATCCTTCCCCTTGTTGGTTACCGTTCTACCACTGAAGAAAAACTCATCATCTACAAATATCAAAGCAATGGAAGTCTGCTTAATCTTTTAAATGATTATATAGCAGGTAGAAAAGATTTCCCATGGAAAGTGCGCCTCAATATAGTATGTGGGATTGCAAGGGGTTTGGCCTTCATATATAGGAAATTGGATGGAAGAGAGGTAATTCCTCATGGAAATCTTAAGCTATCAAATATCCTTCTTAATGAAAAGAATGAACCATTAATAAGTGAGCATGGTTTATCAAAATTCTTAGAATCAAACAGAGGATTCCTCTTTTCCTCTCAAGGATACACAGCTCCTGAAAAGAGTTTAACAGAAAAGGGTGATGTATATAGCTTTGGAGTGATTCTCCTAGAATTACTGACAGGAAAAAGCATAGAAGTAAGTAGAATAGACCTTGCTAGATGGGTCAGATCCATGGTGAGGGAGGAATGGACAGGAGAGGTGTTTGACAAAGAGGTTAGGGAAAATGAACATCAATGGGCATTTCCTTTGCTGAATATAGCCCTCAAGTGTGTGTCACGTTTCCAAGAAAACAGACCAACTACTGGTGAGATTTTGGAGACAATAGAGGAGGTAATGGATCAACATGAACAACAACAGGAACATTCTGCTTCAAAATGTTGTCCTAATGGATCTAACCAAGAATGTTGTTCACTTCACAAAATCATACCTGATACATGGGATTCTCCAGGATCAAATTATTGA 1821 0.3773 MQDTRDFALILRSLVCFSVLAFFTKLCTGGELSESEPFFNFLKAVDPNNVLNITWIGSTSHPCLVKLNGVRCNSNVTNVAGIRLEKLNLSGIIDADSLCRLQKLRVVSLAKNNIRGTIPHSILHCTRLVHLNLTSNQLSGGLPKSLTKLKYLKNLDISNNNFSGMIPSKQEYRHLLTYYVTPIKLESNSTRKWQEESDANTTQSTPDSSSNNTSGHDKKPWYLKGEVLVGIALGIGLLLSSIYFVMKGSPKLIEEMQVGKSQRVSPLNKSTSEVQEEKLKEGDSELVFFVEHHERFTLEDLLRAKADLQSESFCSSLYKVSLENSVHYAVKRLKNVQVSSDEFGETLKQISDLKHPNILPLVGYRSTTEEKLIIYKYQSNGSLLNLLNDYIAGRKDFPWKVRLNIVCGIARGLAFIYRKLDGREVIPHGNLKLSNILLNEKNEPLISEHGLSKFLESNRGFLFSSQGYTAPEKSLTEKGDVYSFGVILLELLTGKSIEVSRIDLARWVRSMVREEWTGEVFDKEVRENEHQWAFPLLNIALKCVSRFQENRPTTGEILETIEEVMDQHEQQQEHSASKCCPNGSNQECCSLHKIIPDTWDSPGSNY. 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00237 606 FunFam Leucine-rich repeat receptor protein kinase EMS1 94 188 - -
Seca7g00237 606 MobiDBLite consensus disorder prediction 191 216 - -
Seca7g00237 606 SMART serkin_6 273 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00237 606 Gene3D Transferase(Phosphotransferase) domain 1 379 587 - -
Seca7g00237 606 Gene3D Ribonuclease Inhibitor 35 213 IPR032675 -
Seca7g00237 606 Gene3D Phosphorylase Kinase; domain 1 268 377 - -
Seca7g00237 606 PANTHER OS05G0588300 PROTEIN 12 570 - -
Seca7g00237 606 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Seca7g00237 606 Pfam Protein tyrosine and serine/threonine kinase 322 560 IPR001245 GO:0004672|GO:0006468
Seca7g00237 606 SUPERFAMILY Protein kinase-like (PK-like) 315 561 IPR011009 -
Seca7g00237 606 SUPERFAMILY L domain-like 60 169 - -
Seca7g00237 606 ProSiteProfiles Protein kinase domain profile. 273 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00237 Seca-Chr7 2619898 2622490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00237 11 564 Receptor kinase-like Gene Family AT5G53320 32.095 2.47e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca7g00237 PK_Tyr_Ser-Thr 4.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00237 - - gmx:100807491 910.212