Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00230 ATGCAAGCCCTGTGGGTCTCCTTGAAGGATAATGTTAAATGTGGAAACAAGCTCACCGATGTAATCAAGCAGCCAGCAAAATGTGGCAAAGGAAGTAGCTACGTTTCAGAAAAGGAGAAGAAAATGAATGAAGAAGATAATGGTTCTCTAATGGAAACTCCACCTACTCCTAGCCAAGTAGTTTCCAAGTCAAGCAACAAGCTTGGACGCCTTTATGAGCTCAGTATTGGTGACCCTTCAAGGAAAATTGTTGAGATGATATTTCAGAAAGCTTGGATGAACACTTCAAAGCCACTGAGGAAGGTTAGAACAGTGCTCAGGGTGAGCTACTCAGCAGAAGTCCTTGAAAGGTTTGAAAAGTACAGAGAAAAGGTGAAGAAGAATGCCTGTGACTGTGAGCAATATCCAAGGCATCCAAGGAGCACAGTAGATGGAAATGAATTGTTGCGGTTCTATGTCACTACAATGAGATGTTTCCAAGGGAAACCTGTGAAGAAAGTTTATGATTTATGTAAAGATTCATCTTGTTGTCTTTGCCAAATAATTCAATTCAATTTCAACACAGAACATGCTGGGATTCAATTGAATACAAGTGACCAAGAGTTGACTAACAGAACAACCTCCAATGCAAGAGTAAAGAATGTGAAAAGAGCAGCAATAGTTTGCAGGATAATTGCTGGAAATGCAGTAAATGAAGTTGATGGTGAATATGGAGAGTCTGACTCAACTGGGCTAGGAGAAATGCAATTTAGCTTAGAAAAATTTGTAGTACAAAATCCCAGTTCTATTCTTCCTTGTTTTGTTATAATGTTCAGCTGA 819 0.3932 MQALWVSLKDNVKCGNKLTDVIKQPAKCGKGSSYVSEKEKKMNEEDNGSLMETPPTPSQVVSKSSNKLGRLYELSIGDPSRKIVEMIFQKAWMNTSKPLRKVRTVLRVSYSAEVLERFEKYREKVKKNACDCEQYPRHPRSTVDGNELLRFYVTTMRCFQGKPVKKVYDLCKDSSCCLCQIIQFNFNTEHAGIQLNTSDQELTNRTTSNARVKNVKRAAIVCRIIAGNAVNEVDGEYGESDSTGLGEMQFSLEKFVVQNPSSILPCFVIMFS. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00230 272 MobiDBLite consensus disorder prediction 49 64 - -
Seca7g00230 272 MobiDBLite consensus disorder prediction 33 47 - -
Seca7g00230 272 Gene3D - 69 272 - -
Seca7g00230 272 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 42 270 - -
Seca7g00230 272 MobiDBLite consensus disorder prediction 28 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00230 Seca-Chr7 2553333 2554412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00230 71 270 C2H2 Transcription Factor Family AT5G54630 33.945 7.12e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00230 - - gmx:100779612 402.134