Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00221 ATGCACCCTGCCACCGATTTTCTCCTCAAACCCATTTTCCTTCATGGCCTTTCTGGCCTCCTCCACCTACTGTTGGTGGTGGCGGTTCTAGTGTCATGGGTTTGGAAGAAAATCACAGCGGGTGCTAGGGATGACTCTAAAGAGAAATCCAGTGACACCCTTTTTACAGTGACCAAGTTTTGTTCTCTTGGTGTTTCTGCTTCCAATCTTGCTCTCTTCCTGTTTAATTACTTCTACTGGTATACAAGTGGTTGGTCTGAAGAACAGCTCGTGACCCTTTTCGATTTGGCGCTCAAAACGGTTGCTTGGGGTGTTGTTTATGTTTGCTTGCTTAAGGGGTTCTTCAATTCAGGTGAAAGAAGAAGATTTCCATTCCTCTTCAGAACTTGGTGCGCTTTCTACCTCTTTGTTTCCTGTTATTCCTTCGTAGTGGACAATGTTATTCTCTATGAAAACCACGTTGCATTACCAACTCAGTACATAGTTTCTGATGTGGTATCTGCTTTGGCGGGCTTGTTCTTCTGTTACATGGGGTATTTTGTGAAAAATGAGGGTGAAGATGATAGAAGTAGTCTTCAAGAGCCTCTTTTGAATGGAGATACACAAGTCAAAGAGTCCAAGGGGAGTGACACTGTTACCCCTTTCTCAAATGCTGGAATTTTCAGCATTCTTACCTTCTCTTGGATGCGTCCTCTTATAGCTCTTGGCAATAAGAAGACCTTAGACCTTGAGGATGTCCCTCAACTGGACAGCAAAGACAGTGTGGTTGGAGCTTTTCCAACTTTCAGGGATAAACTTGAGGCTGATTGTGGTGCAATTAACCACGTGACCACACTTAAGCTGGTGAAGTTATTATTAATCTCAGCTTGGAAAGAGATTCTTTTCACAGCTTTTCTTTGTTTAATGAATACGTTGGCTTCTTATGTTGGTCCTTATCTTATTGATGCTTTTGTTCAATACCTTGATGGAAAACGGCTATATGAAAATCAGGGCTATGTTTTGGTCTCTGCATTTTTCTTTGCAAAGCTTGTTGAATGTCTGTCACAAAGGCACTGGTTCTTTAGGTTGCAGCAAATTGGAATTCGAATCCGGTCACTACTTGTGACAATGATCTATAATAAAGCCTTGACAATTTCATGTCAATCAAAGCAGGGCCACACTTCTGGGGAAATAATCAATTTCATGACTGTTGATGCTGAAAGAGTTGGAGTTTTCAGTTGGTACTTGCATGATTTGTGGATGGTGGCTCTGCAAGTTACATTAGCCTTGTTGATTTTGTATAAAAACCTTGGGCTTGCTTCAATTGCTGCTTTTGTTACAACTGTCATTGTTATGCTGGCAAATATTCCCTTGGGATCATGGCAAGAGAAGTTTCAAAAGAAGCTGATGGAGTCAAAAGATACAAGAATGAAGACCACATCTGAGATTCTGAGGAACATGAGGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCTAAAATAACTGATCTCAGGAACACTGAGCAAGGCTGGTTAAGAAAATTTCTTTATACTTCAGCCATGACTACATTTGTATTTTGGGGTGCCCCCACATTTGTATCTGTTGTTACTTTTGGTACTTGTATGATTTTAGGGATCCCACTTGAATCAGGGAAGATCTTGTCAGCACTTGCAACATTCCGGATTCTTCAAGAGCCCATTTATAATCTTCCAGATACAATCTCAATGATAGCACAAACTAAAGTTTCTCTTGATAGGATTGCATCATTCCTTCGTCTTGATGACTTGCAGTCTGATGTTGTGGAAAAGCTTCCTCGGGATTGTTCTGATACAGCAATTGAAGTAATTGATGGGAGTTTTTCTTGGAGTTTATCTTCTCCTAATCCAACATTGCAGAACATAAATCTCAGAGTTTCTCATGGCATGAGGGTTGCTGTTTGTGGTACTGTTGGGTCAGGCAAGTCTACTTTACTTTCTTGTGTATTGGGAGAAGTACCAAAGATATCAGGTATCCTTAAGGTTTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATACAAAGTGGCAAGATAGAGGATAATATATTGTTTGGTAGAATCATGGATAGGGAAAGGTATGATAAGGTACTTGAAGCCTGTTCCCTGAAAAAGGATCTGGAGATTCTGTCATTTGGTGATCAGACTGTTATAGGAGAGCGTGGAATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGTGCTCTTTACCAAGATGCCGATATATATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCACCTCTTTAAGGAATGCTTGCTGGGCCTTTTAAGTTCAAAGACAGTGGTTTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTTATACTGGTCATGAAAGATGGAAAAATTACTCAATGTGGAAAGTATACTGATCTACTTAACACTGGGACTGATTTTATGGAACTTGTTGGTGCACACAAAAAAGCTTTGTCTACACTTGATTCATTGGATGGAGGGACAGTATCTGATGAAATAAGTACCTTGGAACAAGATGGAAATGTATCTGGCACGCACAGTGTTAAAGAAAAAGAGGCAAACAACAGCAATGGTAAAACAGATGACAATGATGAACCAAAAGGCCAGCTTGTTCAAGAAGAAGAAAGAGAGAAAGGTAGAGTTGGCTTTTCAGTCTATTGGAAGTATATCACAACAGCATATGGAGGAGCTCTTGTACCATTCATATTATTGGCTCAGATTCTTTTTCAAGTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCAATCTCACCAGATGTGGAACCACCTGTTGGAGGAACAACTCTTATAGAAGTATATGTTGGTTTGGCCATTGGAAGTTCTTTCTGCATCCTAGCCAGAGCAATGTTTCTTGTCACAGCTGGTTATAAGACAGCTACTATACTATTTAATAAAATGCACTATTGCATTTTCCGTGCCCCCATGTCATTTTTTGATTCCACTCCTAGTGGGCGAATCCTTAACAGAGCTTCTACTGACCAAAGTGCAGTGGACACAGACATTCCTTATTCAATTGGGTCATTTGCCTTCACCATGATCCAGCTTCTGGGAATTATAGCAGTGATGTCTCAGGTTGCTTGGCAGGTTTTCATTGTCTTCATTCCAGTGATAGCAATCAGTATCTGGTATCAGCAATATTATATACCATCAGCCCGAGAACTATCACGTTTAGTTGGAGTATGCAAAGCCCCAGTCATTCAACACTTTGCTGAAACTATTTCTGGAGCTTCAACCATTAGAAGCTTTGATCAGCAGTCAAGATTTCAGGAAACAAATATGAAACTGGCTGATGGGTATTCTCGGCCAAAATTCAATATTGCTGGTGCTATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTGCAATCACGTTTGCCTTCTCCTTGATATTCCTGATATCTATTCCACAGGGAATCATAGATCCAGGCATTGCTGGTTTAGCTGTCACCTACGGGCTTAATTTAAACATGATACAAGCTTGGATGATATGGAGTCTTTGCAATTTAGAGAACAAAATTATATCAGTAGAAAGAATAGTTCAGTATACTTGCATTCCCAGTGAGCCTCCCCTTGTTGTAGATGAAAATCGGCCAGATCCTTCTTGGCCCTCATATGGCGAGATTGATATACAGGACATGCAGGTCCGTTATGCTCCACATCTTCCACTTGTGTTGCGTGGCATAACATGCACATTCCGGGGAGGACTGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCAACTCTCATACAAACACTTTTCCGAATCATTGATCCTACTGTTGGGCGAATTATGATTGACAGCATCGACATTTCTTCAATTGGACTGCATGATTTGAGGTCTAGACTAAGCATCATTCCTCAGGATCCAACCATGTTTGAGGGGACAGTGAGAAATAATCTGGACCCCCTGGAAGAGTACACTGATGAACAAATTTGGGAGGCCTTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTAGACTCTGCAGTTACTGAGAATGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTATGCCTTGGTAGGGTGCTGCTTAAGAAAAGCAAGGTTTTGGTTCTTGATGAAGCCACTGCATCAGTTGATACAGCTACGGATAATTTAATTCAGCAAACTCTTAGGCAACATTTCTCTGATTCCACAGTCATTACAATTGCACATCGAATAACTTCTGTTCTTGACAGTGATATGGTTTTGCTTCTTAATCAAGGACTTATTGAGGAGTACGACTCCCCAACAACATTGTTAGAAGATAAGTCATCATCTTTTGCTCAACTTGTTGCAGAGTATACCATGAGGTCCAACTCCAGTTTTGAGAAATCTGTTGATCACTGA 4461 0.4084 MHPATDFLLKPIFLHGLSGLLHLLLVVAVLVSWVWKKITAGARDDSKEKSSDTLFTVTKFCSLGVSASNLALFLFNYFYWYTSGWSEEQLVTLFDLALKTVAWGVVYVCLLKGFFNSGERRRFPFLFRTWCAFYLFVSCYSFVVDNVILYENHVALPTQYIVSDVVSALAGLFFCYMGYFVKNEGEDDRSSLQEPLLNGDTQVKESKGSDTVTPFSNAGIFSILTFSWMRPLIALGNKKTLDLEDVPQLDSKDSVVGAFPTFRDKLEADCGAINHVTTLKLVKLLLISAWKEILFTAFLCLMNTLASYVGPYLIDAFVQYLDGKRLYENQGYVLVSAFFFAKLVECLSQRHWFFRLQQIGIRIRSLLVTMIYNKALTISCQSKQGHTSGEIINFMTVDAERVGVFSWYLHDLWMVALQVTLALLILYKNLGLASIAAFVTTVIVMLANIPLGSWQEKFQKKLMESKDTRMKTTSEILRNMRILKLQGWEMKFLSKITDLRNTEQGWLRKFLYTSAMTTFVFWGAPTFVSVVTFGTCMILGIPLESGKILSALATFRILQEPIYNLPDTISMIAQTKVSLDRIASFLRLDDLQSDVVEKLPRDCSDTAIEVIDGSFSWSLSSPNPTLQNINLRVSHGMRVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSPWIQSGKIEDNILFGRIMDRERYDKVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADLILVMKDGKITQCGKYTDLLNTGTDFMELVGAHKKALSTLDSLDGGTVSDEISTLEQDGNVSGTHSVKEKEANNSNGKTDDNDEPKGQLVQEEEREKGRVGFSVYWKYITTAYGGALVPFILLAQILFQVLQIGSNYWMAWATPISPDVEPPVGGTTLIEVYVGLAIGSSFCILARAMFLVTAGYKTATILFNKMHYCIFRAPMSFFDSTPSGRILNRASTDQSAVDTDIPYSIGSFAFTMIQLLGIIAVMSQVAWQVFIVFIPVIAISIWYQQYYIPSARELSRLVGVCKAPVIQHFAETISGASTIRSFDQQSRFQETNMKLADGYSRPKFNIAGAMEWLCFRLDMLSAITFAFSLIFLISIPQGIIDPGIAGLAVTYGLNLNMIQAWMIWSLCNLENKIISVERIVQYTCIPSEPPLVVDENRPDPSWPSYGEIDIQDMQVRYAPHLPLVLRGITCTFRGGLKTGIVGRTGSGKSTLIQTLFRIIDPTVGRIMIDSIDISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSAVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVLDSDMVLLLNQGLIEEYDSPTTLLEDKSSSFAQLVAEYTMRSNSSFEKSVDH. 1487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00221 1486 FunFam ABC transporter C family member 10 277 590 - -
Seca7g00221 1486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 605 830 IPR027417 -
Seca7g00221 1486 CDD ABC_6TM_ABCC_D2 917 1211 IPR044726 GO:0140359
Seca7g00221 1486 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 294 574 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca7g00221 1486 MobiDBLite consensus disorder prediction 856 893 - -
Seca7g00221 1486 Gene3D ABC transporter type 1, transmembrane domain 879 1217 IPR036640 GO:0005524|GO:0016020
Seca7g00221 1486 Gene3D ABC transporter type 1, transmembrane domain 274 589 IPR036640 GO:0005524|GO:0016020
Seca7g00221 1486 Pfam ABC transporter transmembrane region 920 1162 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca7g00221 1486 Pfam ABC transporter transmembrane region 294 561 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca7g00221 1486 SUPERFAMILY ABC transporter transmembrane region 917 1218 IPR036640 GO:0005524|GO:0016020
Seca7g00221 1486 FunFam ABC transporter C family member 5 880 1217 - -
Seca7g00221 1486 CDD ABCC_MRP_domain1 608 808 - -
Seca7g00221 1486 Gene3D - 1219 1472 IPR027417 -
Seca7g00221 1486 FunFam ABC transporter C family member 3 1219 1471 - -
Seca7g00221 1486 ProSitePatterns ABC transporters family signature. 733 747 IPR017871 GO:0005524|GO:0016887
Seca7g00221 1486 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 215 1473 - -
Seca7g00221 1486 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 608 831 IPR003439 GO:0005524
Seca7g00221 1486 Gene3D - 590 842 IPR027417 -
Seca7g00221 1486 SMART AAA_5 1262 1447 IPR003593 GO:0016887
Seca7g00221 1486 SMART AAA_5 635 808 IPR003593 GO:0016887
Seca7g00221 1486 CDD ABCC_MRP_domain2 1234 1454 - -
Seca7g00221 1486 Pfam ABC transporter 626 760 IPR003439 GO:0005524
Seca7g00221 1486 FunFam ABC transporter C family member 5 593 840 - -
Seca7g00221 1486 CDD ABC_6TM_ABCC_D1 295 582 IPR044746 GO:0140359
Seca7g00221 1486 Pfam ABC transporter 1253 1401 IPR003439 GO:0005524
Seca7g00221 1486 SUPERFAMILY ABC transporter transmembrane region 287 587 IPR036640 GO:0005524|GO:0016020
Seca7g00221 1486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1228 1466 IPR027417 -
Seca7g00221 1486 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1238 1470 IPR003439 GO:0005524
Seca7g00221 1486 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 919 1199 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca7g00221 1486 MobiDBLite consensus disorder prediction 870 893 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00221 Seca-Chr7 2462232 2467951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00221 608 838 Calmodulin-binding Proteins AT2G36910 29.482 9.32e-23 104