Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00209 ATGGCTAAGATGAGATTATCATCAGTTTTTGAAGTTTTGGTTTTGGTTTTTCCAGTTCTGTTATTGGTGTGGTGTGTTCAGGTGCAAGGTGATAGTAACAATACTAGAAACTTCATTACTTGGGATGACTTCATAGTGGATGAAGAGAGTCTAGCCTCCAATGTTGGTGGTCAAGTTATTGTGGTGGATCAGAATGGTAATGGAGATTCAACAACTGTTCAAGGGGCTGTAGATATGGTTCCAGAAAACAACACAGAAAGGGTGAAGATCTATATTTATCCTGGAACTTACAGAGAAAGAGTGCATGTGCCAAAAAGCAAGCCATTTATATCATTCATTGGCAAACCCAATATAACAGTGAATGCCAATGTAACAGACATTGCCAATGCCATACCAATTATTACAAATAGCACTAAGGCATCAGATAAAGGCTCAGATGGGCAAGAAATGGGCACAGTTAGTACAGCAACTGTATGGATAGAATCTGATTTCTTCTGTGCAACTGTTCTTACTATTGAGGAGTGTTTGCTGTACTCTGTAGCTGAGTATTGGGGAGCAATTGCAGCTCATCACAGGGAATCAGCAGAGGAAGATACAGGATTTTCATTTGTTGGTTGCACAATCAAAGGAACAGGTAGTATCTTACTTGGGAGAGCTTGGGGGGAGTATGCCACAACAATATATTCATACTGTGACATGGATGATATCATTAGCCCCATGGGATGGAGTGATTGGGATGATCCATCTAGACAGAGGACTGCAATGTTTGGGGAGTATCAGTGTTCAGGAAAAGGATCAAATAGAACTGAGAGGGAAGGTGGCCATGGTGGTGTTAGGAATTACATTAGTTGGGAAGATTTGTTGGTAGATGGAAGTTTGGCCCTGAAGTCCAATAACGAGGTTCGAGTTTTTGTGGTTGATCAACATGGCAAGGGACATTCCAAAACTGTTCAAGGAGCAGTGGATATGGTTCCAGATCATAACAGACAGAGGGTCAAAATATACATTTATCCAGGACTTTACAGAGAAAAAGTGCTTGTGCCAAGTACCAAGCCTTATATATCATTTATAGGTAAAAGAAATGAAACAGCAAGTGCTGTAATTTCTTGGAACAGTAAGTCATCTGACAGAGGTCCAAATGGCCAAGCATTAGGCACCTATGGTTCAGCAACTGTAGCAGTTGAATCAGATTATTTTTGTGCAACTGAGATCACCTTTGAGAACACAGTGGTTGCAGCACCTGGTGGAGAAGGAATGCAAGCAGTGGCATTGAGGGTAGATAGTGATAGAGCCATGTTCTATAGAGTTAAGATTAAAGGAACACAGGACACTCTCTTGGACAACACAGGAACTCATTACTACTACAGGTGTCTCATCCAAGGAAAAGTTGATTTTATCTTTGGCAGTGCTAAATCACTCTATGAGAAGTGTCATCTTCAGTCAATAGCTGAGAACTATGGAGCAATTGCAGCACATCACAGGGATTCACCACATGAAGACACAGGCTTTTCTTTTGTAGGGTGTGGTATAAGAGGAACTGGTAGTGTGTACCTTGGCAGAGCATGGGGGAACTATTCAAGAATAATATACTCAAATTGTAATATGGAGGATATTATTAACCCTGAAGGATGGTCAGAATGGAATCATCCAGAAAGAAAAAAAAGCATGTGGTGGTATTTCAGGACTGCAGTGTTTGGTGAGTATCAATGCCATGGAAGAGGGGCAGATAGAAGACAAAGGGTGCCTTGGTCAAAATCATTCAGCTATGAGGAAGTAAGGCCTTTCCTGGACAAGAGCTTCATAAATGGAGATCAGTGGCTTAGACTGTAG 1830 0.4126 MAKMRLSSVFEVLVLVFPVLLLVWCVQVQGDSNNTRNFITWDDFIVDEESLASNVGGQVIVVDQNGNGDSTTVQGAVDMVPENNTERVKIYIYPGTYRERVHVPKSKPFISFIGKPNITVNANVTDIANAIPIITNSTKASDKGSDGQEMGTVSTATVWIESDFFCATVLTIEECLLYSVAEYWGAIAAHHRESAEEDTGFSFVGCTIKGTGSILLGRAWGEYATTIYSYCDMDDIISPMGWSDWDDPSRQRTAMFGEYQCSGKGSNRTEREGGHGGVRNYISWEDLLVDGSLALKSNNEVRVFVVDQHGKGHSKTVQGAVDMVPDHNRQRVKIYIYPGLYREKVLVPSTKPYISFIGKRNETASAVISWNSKSSDRGPNGQALGTYGSATVAVESDYFCATEITFENTVVAAPGGEGMQAVALRVDSDRAMFYRVKIKGTQDTLLDNTGTHYYYRCLIQGKVDFIFGSAKSLYEKCHLQSIAENYGAIAAHHRDSPHEDTGFSFVGCGIRGTGSVYLGRAWGNYSRIIYSNCNMEDIINPEGWSEWNHPERKKSMWWYFRTAVFGEYQCHGRGADRRQRVPWSKSFSYEEVRPFLDKSFINGDQWLRL. 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00209 609 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 297 608 - -
Seca7g00209 609 FunFam Pectinesterase 299 609 - -
Seca7g00209 609 Gene3D - 302 609 IPR012334 -
Seca7g00209 609 Gene3D - 172 286 IPR012334 -
Seca7g00209 609 SUPERFAMILY Pectin lyase-like 58 272 IPR011050 -
Seca7g00209 609 Gene3D - 43 171 IPR012334 -
Seca7g00209 609 Pfam Pectinesterase 305 604 IPR000070 GO:0030599|GO:0042545
Seca7g00209 609 Pfam Pectinesterase 60 117 IPR000070 GO:0030599|GO:0042545
Seca7g00209 609 Pfam Pectinesterase 186 271 IPR000070 GO:0030599|GO:0042545
Seca7g00209 609 SUPERFAMILY Pectin lyase-like 303 607 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00209 Seca-Chr7 2316629 2327324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00209 273 554 Carbohydrate Esterase AT5G55590 60.066 4.17e-127 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00209 K01051 - gmx:100804220 527.709