Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00187 ATGCATCCCAAAAAAAGAACCTTCTTCTTCTTCTTCTTCTCGATCTTCTTCGAAGCAACCTTCGTCTCCGGCAACGTGAGCTTCGACTTCCCTTATTTCACCATCAACAACAACATCACTCTGTTCGGCGATTCCTACCTAAGGAACGGCGTCGTTGGCCTCACCAGACCCATCACCACTCCCACTTCCAGCACCGGAGCCGTAGCATACTCCAACCCTATCTCCCTCTTCGACCCTCAAACCAACACCACCTCCTCCTTCTCCACAACCTTCTCTTTCTCCATCACCAACATCAACCCTACCTCCTTCGGTAACGGCCTCGCTTTCTTCCTCTCCCCTAACAACCTCACATCCGCCAATCGCGCCGCATCTCTCGGCCTCCCTAACAACTTCGTGGCAGTTGAATTCGATACCCGCCAAAATAACCGTTTCAACGACCCTAACGAGAATCACGTGGGCTTAGACATCAACACTATGAACTCTCTCAAAACAGGGGACCCTATCATGCACGGCATTGATCTCAAGAGCGGAAACACCATCAACGCTTGGATCGATTACAAGTCCGATCGAACGGTTCTCGACGTTTTCTTGAGTTACTCTCGCTCTAAACCCTTGGATCCTATCCTCACTGTTCGTGTTGATCTTTCTGAGCACTTCAACGACGTCGTTTACGTTGGGTTCTCTGCTTCCACTGAAGGAAGCACAGAGCTTCATCAAATTCAAAGTTGGAGCTTTCACACCATTGGGTTGAAGTTGAAGAAGCCTCACAATGTTTCTGACAACTCCGTGAGTGTGACAGTGGGTGTTCATGCTTCACATTCTTCAGCCAAGAACCATGGCAAGAGGGTTGGGATTGGTTTTGCTGTTGCAGGTCCTGTTTTTCTCTGTGTGGCTTTTTTTATCTTGTTAGGGTTTGTGAAATGGAAAGGTGTGAGAAAAGGGAAAGGTTTCAAGGGTTTTACTACTACTGCTACTGGGTTTGTTGTGTGTCCTAGAGAGTTTGATTACAAAGAGTTGAAATCTGCTACCAGAGAGTTTCATCCAAGTCTAGACATTCCCATGAAGGAAAGACAATTTTTGGCTGAATTGAACATTATAGCTGGTTTAAGGCACAAGAATTTGGTGCAGCTTCAAGGTTGGTGTGTTGAGAAAGGTGAGTTGTTGCTTGTGTATGATTTCATGCCTAATGGAAGCTTGGACAAGATGCTTTACAAGGATCCTGAAAGGGGGAAATTGTTGAATTGGTCTCATAGGGTTAATATTGCTCTTGGGTTGGCTTCTGTGTTGGTTTATCTTCATCAAGAGTGTGAGCAGAGGGTGATTCATAGGGATATTAAGACTGGGAATATATTGTTGGATGGGAATTTCAACCCTAGGTTGGGGGATTTTGGATTGGCAAAATTAATGGATCATGATAAGAGCCCTGTTTCAACATTGACTGCTGGAACAATGGGGTACCTTGCACCTGAGTATCTTCAATATGGGAAGGCTAATGATAAGACAGATGTTTTTAGCTATGGGGTGGTTGTGCTTGAGGTGGCTTGTGGGAAGAGGCCAATTGAAAGGGAGGGGTCAAAGATGGTAAATTTGGTTGATTGGGTTTGGGGGTTGCACTCTGAAGGGAAGATTATTGAGGCAGCAGATAAAAGGTTGAATGGGGAATTTGAGGAGGAGGAAATGAGGAAGCTTTTGCTATTGGGGTTGTGTTGTGCTAACCCTGATAGTGCTGAGAGGCCTTCCATGAGAAGGGTCTTGCAGATACTCAACAATGAAGCTGCGCCAATTGTTGTGGCAAAAGTGAAGCCATGCCTCACATTCTCATCTGATTTGCCCCTCACTATTGATGAGATTGTTAAGGAGGCTGAAGAAGATTCCAATATCAGTCAGTCTATGTGTGAGATAAAAATTGGCTGA 1914 0.4545 MHPKKRTFFFFFFSIFFEATFVSGNVSFDFPYFTINNNITLFGDSYLRNGVVGLTRPITTPTSSTGAVAYSNPISLFDPQTNTTSSFSTTFSFSITNINPTSFGNGLAFFLSPNNLTSANRAASLGLPNNFVAVEFDTRQNNRFNDPNENHVGLDINTMNSLKTGDPIMHGIDLKSGNTINAWIDYKSDRTVLDVFLSYSRSKPLDPILTVRVDLSEHFNDVVYVGFSASTEGSTELHQIQSWSFHTIGLKLKKPHNVSDNSVSVTVGVHASHSSAKNHGKRVGIGFAVAGPVFLCVAFFILLGFVKWKGVRKGKGFKGFTTTATGFVVCPREFDYKELKSATREFHPSLDIPMKERQFLAELNIIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLYKDPERGKLLNWSHRVNIALGLASVLVYLHQECEQRVIHRDIKTGNILLDGNFNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKANDKTDVFSYGVVVLEVACGKRPIEREGSKMVNLVDWVWGLHSEGKIIEAADKRLNGEFEEEEMRKLLLLGLCCANPDSAERPSMRRVLQILNNEAAPIVVAKVKPCLTFSSDLPLTIDEIVKEAEEDSNISQSMCEIKIG. 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00187 637 Pfam Protein kinase domain 342 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00187 637 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 247 IPR013320 -
Seca7g00187 637 PANTHER - 54 594 - -
Seca7g00187 637 Gene3D - 24 272 - -
Seca7g00187 637 SMART serkin_6 300 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00187 637 CDD STKc_IRAK 356 590 - -
Seca7g00187 637 Gene3D Phosphorylase Kinase; domain 1 316 394 - -
Seca7g00187 637 ProSiteProfiles Protein kinase domain profile. 297 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00187 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Seca7g00187 637 Pfam Legume lectin domain 26 249 IPR001220 GO:0030246
Seca7g00187 637 Gene3D Transferase(Phosphotransferase) domain 1 395 601 - -
Seca7g00187 637 FunFam L-type lectin-domain containing receptor kinase VIII.1 394 606 - -
Seca7g00187 637 SUPERFAMILY Protein kinase-like (PK-like) 357 609 IPR011009 -
Seca7g00187 637 ProSitePatterns Legume lectins beta-chain signature. 132 138 IPR019825 -
Seca7g00187 637 CDD lectin_legume_LecRK_Arcelin_ConA 26 249 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00187 Seca-Chr7 2181173 2183168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00187 23 627 Receptor kinase-like Gene Family AT5G55830 55.994 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca7g00187 Pkinase 5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00187 - - adu:107496163 823.157