Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00164 ATGACCATGGAAAGTGGAAGAGAGGATGAGATTGAGGACATGTCAATGTCACCCCCATCTGTGGGCTCCATGCAGATTGCAGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATACCTTCCAAATAGATACTCAGAGATTGACATAAAAGTTGAGGATTCTAGTTTAAACCAAGATCCCCCTCTCCCTGTATATCTCAAGTTTGAAGATGTAGAGTATAAAGTGAGAAATAGCAAAGGAGCTTCTAATAACCCTGTGAAGACAATGGTGTCAAAGGTAGCCACACAACTCCATGTGGAAGAAGATAGATACAAGAAAATTTTAAAGGGTATCACAGGAAGCATTGGCCCTGGTGAAATTCTTGCATTGATGGGTCCTTCTGGTAGTGGGAAGACAACCTTGTTGAGAGTTGTAGGAGGAAGATTGCTTGAGAATGTAAAGGGAAAGATAACTTATAATGATGTTCAATATAATCCAGCTATCAAGAGGAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTCCCACAACTTACAGTAGAAGAAACATTAATCTTCTCTGCATTCTTAAGGCTACCAACCAACATGAGCAGACAACAAAAATATGCAAGAGTGGAAACCACTATAAAGGAGCTAGGCCTTGAAAGATGCCGCCACACAAAAATAGGTGGAGGGTTTCTCAAAGGCATATCAGGAGGAGAAAGGAAGCGAACTAGCATAGGCTATGAAATTCTTGTTGATCCTTCATTGCTGCTACTTGATGAACCAACTTCAGGCCTTGATTCCACCTCAGCAAATAGACTCCTCCTTACTCTTCAGGGACTCGCCAAGGCTGGAAGGACCATAATCACAACAATTCACCAGCCATCAAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTGATATCTGAAGGCTATCCTGTTTACTATGGGAAGGCTAGAGAATCAATGGAGTATTTTTCATCCTTGAAGTTCATCCCTGAAATACCAATGAATCCTGCAGAATTCTTGCTTGATTTGGCAACTGGACAAGTGAATGATATAAGTGTTCCTCAGATTATCTTGAAAGATCAAGAATCTACTGACCCTTCAAAAGCTGTGATTAAATATCTACAACTCAAGTATAAAGACATACTGGAGCCAAAAGAAAAAGAAGAGAATCATGGAGCAGCAAACACACCAGAACATCTTCAACTAGCCATTCAGGTTAAAAAGGAATGGACATTGAGTTGGTTGGACCAATTCATTATTCTTTATAAGAGAACATTCCGAGCAAGATGCAAGGACTATTTTGATAAATTAAGACTAGTTCAAGCACTTGGAATTGCACTTTTGTTGGGGCTACTTTGGTGGAAATCTTCAACCAATACAGAGGCTCAACTCAGAGATCAGGTTGGTTTAATGTTCTATATATGTATATTCTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTCTTTCCATTTGAAAAAGTTTACTTGGTAAAAGAAAGGAAAGCAGACATGTATAGACTAAGTGTATACTATGCAAGCAGCACTTTGTGTGATATGGTGGCACATGTTTTCTATCCTACTTTTTTCATGCTTATCTTGTACTTCATGGCTGGCTTTAAGAGGACTGTTGCTTGCTTCTTCCTTACATTGTTTGCTGTGCTGCTTATAGCTATAACAAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCGGGGATGGTTGCTTCTTTGATACTAATGTTATTCCTTCTCACAGGTGGCTACTATGTCCAGCACATACCAAAGTTTATGCAGTGGTTGAAGTACTTGTCCTTCATGTACTATGGGTTCAGGCTTCTTCTAAAAGTGCAGTATTCAGGAGACCAATTATATGAGTGTGAAAGCAAAGGAGGGTGTAGGACCCTGCAGAGTTCACCTTCATTTGACACTGTAAATTTGAAAGGAGGCTTAAGTGAAGTGTGGGTTCTGCTTGCCATGGCTTTATGCTTTCGGGTGTTTGCTTACTTCTGTCTCCGAAGACGAATTGACATATGCAATTAA 2067 0.4035 MTMESGREDEIEDMSMSPPSVGSMQIAGSNGFGHSMEFMSQAYLPNRYSEIDIKVEDSSLNQDPPLPVYLKFEDVEYKVRNSKGASNNPVKTMVSKVATQLHVEEDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLLENVKGKITYNDVQYNPAIKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPTNMSRQQKYARVETTIKELGLERCRHTKIGGGFLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANRLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKARESMEYFSSLKFIPEIPMNPAEFLLDLATGQVNDISVPQIILKDQESTDPSKAVIKYLQLKYKDILEPKEKEENHGAANTPEHLQLAIQVKKEWTLSWLDQFIILYKRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYASSTLCDMVAHVFYPTFFMLILYFMAGFKRTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYLSFMYYGFRLLLKVQYSGDQLYECESKGGCRTLQSSPSFDTVNLKGGLSEVWVLLAMALCFRVFAYFCLRRRIDICN. 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00164 688 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 334 IPR003439 GO:0005524
Seca7g00164 688 SMART AAA_5 121 312 IPR003593 GO:0016887
Seca7g00164 688 Pfam ABC-2 type transporter 291 353 IPR043926 GO:0140359
Seca7g00164 688 MobiDBLite consensus disorder prediction 1 20 - -
Seca7g00164 688 CDD ABCG_EPDR 67 316 - -
Seca7g00164 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 57 675 - -
Seca7g00164 688 FunFam ABC transporter G family member 22 99 328 - -
Seca7g00164 688 Gene3D - 97 329 IPR027417 -
Seca7g00164 688 Pfam ABC-2 type transporter 419 627 IPR013525 GO:0016020|GO:0140359
Seca7g00164 688 Pfam ABC transporter 112 262 IPR003439 GO:0005524
Seca7g00164 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 327 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00164 Seca-Chr7 1973343 1976663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00164 110 295 Calmodulin-binding Proteins AT2G36910 29.534 1.53e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00164 K05681 - gmx:100815259 1237.25