Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00163 ATGTCTTTCAAATTTGGACAAATTCTGAACTTAGGCAAAAGGGTATCAGTTATCACTATCCTTTGTTCATGTATTCTTGATTTAATTCCAAAGAGAACATTTCAAATGAATTCTAGGTGCTTCCTTCCACTAGAGTCCATGTTTAACTCAAATAGCATGGTTCCATTTTCTTCAAATTCTGCAGCAGAAGATAGAGTGACTAGTTCTAGAAACAGGCCTCCACGTGCCACCCCACCTCCATTTTTGGTTCGGATGGCCATGAGAATATCTAGAGCAAGGTGGTTTACTTTCTTAAGAAGAGTATTCCATTACCAAAATGGATCAAGGTCCAATCTTGGCACTAACCCTTTCAATTCTAGCACTTGGATGATGCTGGAGTTTATTGCCTTGATAGTTCAGATAACCATTACAACATTCACTTTGGTCATTTCAAAAAGGGAGAGACCTGTTTGGCCTATGAGGATATGGATTGCTGGTTATGATATTGGATGTGTTCTTAATCTTCTGATACTTTATGGGCGCTACCGTCAAATTTATCTGACTCAAGGAGATGCTATCAACCTTTCTGATATGGAACAACAGAGAAACAATGAAGAAACCAGTGTATACAGGATGTCACATTTGGTGAATAAATGCCGGACTTCACTTGAGCTATTCTTTGCCATATGGTTTGTGATGGGAAATGTTTGGGTTTTTGACTCACGTTTTGGATCATTTCACCAAGCTCCAAAACTCCATGTGCTATGCATCACCTTGCTTGCTTGGAATGCAATCTGCTACTCTTTCCCTTTCCTACTATTTCTACTTTTATGCTGCTGTGTGCCACTAATTAGCAGCCTCCTCGGTTACAACATGAACATGGCCTCTTCTAATAGAGGAGCATCTGATGATCAAATTTCACAACTTCCAAGTTGGAGGCATAAAGAAGCTCATAACAAGTTAGAGCTTGGCAATGACTCTGAAGCCAGTGAAAAATTGATTAATGAAGATTCTGTAAGTGGCACCATCAATAATATAAAAGGAGTAATGCTACTAAAAATCCAAATGACACACAAAAAAAGACAACTGTGA 1071 0.3875 MSFKFGQILNLGKRVSVITILCSCILDLIPKRTFQMNSRCFLPLESMFNSNSMVPFSSNSAAEDRVTSSRNRPPRATPPPFLVRMAMRISRARWFTFLRRVFHYQNGSRSNLGTNPFNSSTWMMLEFIALIVQITITTFTLVISKRERPVWPMRIWIAGYDIGCVLNLLILYGRYRQIYLTQGDAINLSDMEQQRNNEETSVYRMSHLVNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHQAPKLHVLCITLLAWNAICYSFPFLLFLLLCCCVPLISSLLGYNMNMASSNRGASDDQISQLPSWRHKEAHNKLELGNDSEASEKLINEDSVSGTINNIKGVMLLKIQMTHKKRQL. 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00163 356 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 53 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00163 Seca-Chr7 1966171 1969097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00163 77 308 C3H Transcription Factor Family AT5G55970 75.536 3.21e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00163 - - gmx:100813670 513.842