Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00149 ATGAATACTAAGTCAGTTGTGGATTTAATGGAATCTTCCTCTGAGGTTCATTTTTCTGGATTTCACATGGATGGCTTAGAGCAAAGAAAGGCTGGCATGGAGCAACCAACCACTTCAGAAACTGACATGTATAAACAACCCTTTGTCATAGGTGTTGCTGGGGGAGCAGCATCTGGCAAGACAGCCGTTTGTGATATGATTATTCAACAGCTTCATGATCAACGAGTTGTACTTGTTAATCAGGATTCTTTTTACCATAATTTGACTGAGGAGGAACTTACAAGAGTACACGATTACAACTTTGACCATCCTGAAGCTTTTGATACTCAGCAATTGCTACGTGTCATGGACAAGTTGAAGCGTGGTCAAGCAGTAGATATTCCGAAGTATGACTTTAAGGGTTACAAGAAGGATGTGTTTCCAGCAAGAAGGGTAAACCCTGCAGATGTTATAATTTTGGAAGGCATCCTTGTTTTCCATGACCCACGTGTTCGGGCATTGATGAATATGAAGATATTTGTTGACACAGATGCTGATATTCGTCTGGCAAGAAGGATTAAGCGTGATACTGCTGAGAATGCTCGCGATATTGGAGCAGTGCTTGATCAGTATTCTAAATTTGTGAAGCCAGCTTTTGATGACTTTATCCTTCCCACAAAGAAGTATGCTGATATCATTATACCCCGTGGAGGAGATAATCATGTGGCTATTGATTTGATTGTACAGCATATTCGCACAAAGCTTGGCCAGCATGACTTGTGTAAAATATATCCTAATTTATATGTTATCCAGTCTACTTTTCAGATAAGGGGCATGCACACCTTGATACGCGATTCTCAGACAACAAAACATGACTTTGTATTTTATTCTGACCGTTTGATTCGTTTGGTTGTAGAACATGGTCTAGGGCATCTTCCATTTACAGAAAAGCAAGTAATCACTCCAACTGGGTCTGTATACAGTGGTGTGGATTTTTGTAAGAGGTTGTGTGGTGTCTCTATCATCAGGAGTGGGGAAAGCATGGAGAATGCTTTACGAGCTTGCTGCAAAGGTATCAAGATTGGGAAAATTCTTATTCATAGAGAAGGTGACAATGGTCAACAGTTGATATATGAGAAGTTGCCTAATGATATCTCAGATAGGCATGTGTTACTGTTGGATCCTATCTTAGGCACAGGTAATTCGGCTGTTCAAGCAATTTCTTTACTTCTAAGGAAGGGTGTACCAGAGTCCAACATTATTTTTCTCAATCTCATATCAGCACCTCAAGGTGTGCATGTGGTCTGCAAAAGATTTCCGAGAATAAAAATCGTGACATCTGAGATTGACATTGGTTTGAATGAAGATTTCCGTGTCATACCTGGGATGGGCGAGTTTGGGGACCGGTACTTTGGAACAGATGATGAGGACCAGCAGGTGGTGGCCCCTTCGAAGTAG 1437 0.4113 MNTKSVVDLMESSSEVHFSGFHMDGLEQRKAGMEQPTTSETDMYKQPFVIGVAGGAASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELTRVHDYNFDHPEAFDTQQLLRVMDKLKRGQAVDIPKYDFKGYKKDVFPARRVNPADVIILEGILVFHDPRVRALMNMKIFVDTDADIRLARRIKRDTAENARDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLRKGVPESNIIFLNLISAPQGVHVVCKRFPRIKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDEDQQVVAPSK. 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00149 478 PRINTS Uridine kinase signature 47 64 - -
Seca7g00149 478 PRINTS Uridine kinase signature 193 204 - -
Seca7g00149 478 PRINTS Uridine kinase signature 77 88 - -
Seca7g00149 478 PRINTS Uridine kinase signature 122 137 - -
Seca7g00149 478 PRINTS Uridine kinase signature 179 189 - -
Seca7g00149 478 PRINTS Uridine kinase signature 215 228 - -
Seca7g00149 478 Gene3D - 251 466 IPR029057 -
Seca7g00149 478 FunFam Uridine kinase 44 250 - -
Seca7g00149 478 CDD PRTases_typeI 324 439 IPR000836 -
Seca7g00149 478 NCBIfam uridine kinase 45 247 IPR000764 -
Seca7g00149 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 240 IPR027417 -
Seca7g00149 478 SUPERFAMILY PRTase-like 250 467 IPR029057 -
Seca7g00149 478 FunFam Uridine kinase 251 466 - -
Seca7g00149 478 CDD UMPK 49 247 IPR000764 -
Seca7g00149 478 Gene3D - 43 250 IPR027417 -
Seca7g00149 478 Pfam Uracil phosphoribosyltransferase 265 466 - -
Seca7g00149 478 PANTHER URIDINE KINASE 42 376 - -
Seca7g00149 478 Pfam Phosphoribulokinase / Uridine kinase family 49 235 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00149 Seca-Chr7 1816388 1823669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00149 1 469 PRT Gene Family AT4G26510 84.778 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00149 K00876 - gmx:100798205 914.835