Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00114 ATGGAAGCAAACAAAGAGGAAGCACTTAAAGCAATAGAGAATGCAGAGAAGAGATTTTCTCAGAGAGACTTTGCAGGTGCAAAAAACTATGCTGTAAAGGCTAAAACGCTTTGTCCGGAATTAGAGGGTTTATCTCAAATGGTGGCCACATTTGAAGTTTATATTGCTTCTGAGGTCACACATAATGGTGAACTGGATTATTATTCTATTCTTGGATTAAAACCTTCTGCAGATAAAGAGGCTGTCAAGAGACAGTACAAGAAGATGGCAGTTTTGCTTCATCCAGACAAGAATAAATGTGTGGGAGCTGATGGGGCATTTAAGCTTGTTTCTGAGGCATGGACTTGGCTATCAGATAGTACTATGCGTAGTTCTTACGATCTCAAGAGAAATGGACAGTCAGGCGGGATTAATCACACAAATTTGTCTTCTGTCCATGCCACAGGGGCTACAGTTTATAACAAATGTTCCAATTTGACAACCTCTCGTAGCGGCCTTGACACCTTTTGGACAATCTGCACCTCTTGTAAGGTCCAGTATGAGTATCTGCGCAAGTATGTGAATAAAAGACTCTCCTGTAAGAACTGTCGTGGCACTTTTGTTGCTGTTGAAACTGGGGCAGCCCCAGCAAATGGTTCATTTCCATATTGTCCTTGGTCATATGTGCCAGGAAATGGGTATGGAAGTCATTCATTTGATGGGGTTACATATGTTCCAACTAATGCCACCTATTTCAATGGGAATGGGGTCACGGGATATCATTCTGGACATGGACATGGACATGGACATGGACATGGATATGAGTATGTTTCAAATGCTTCATTCCAGTGGGGCTCTGCTGGAGTTATCCATCAAAATGGATCAACGACCTTACCAGCTGATTCTGTTTATCAGGCCAATGGAAATGTGAATGTGAAGAGGGGGAGACCTAAATTAAAATCAGGACCTGATGGAAGGCATCATGTGGCAGAGACTGTGGCCAATATAAATTCAGATGTATCATTCTCCTGTAATGAACCACAGGAAGTTAAGGCAAGTAGACCTGACAAGAAACGGAAAGTTGTGGCAGGAGCCAATTTCAGAAATGGCTATGAAGAAAAGGGGTCAAAATGTGCCTCAGAAGCAATGGTGTCTAATGGAAATGATGGTGTCGGTCATGGCCAGAAGCTTTCCTGCACAAATGAAGTTCAAACCAAACAGTGTTTCATGCCACCGCCATTTGACGCGAGGAAACTCTTGATTGAGAAAGCCAGGACAGAAATTAGGAAGAAACTAGAAGAGATGAAGTTGTCATCTGAAGCTGCTGTAGCTGCAACTCTGAATGAGAGAGAAAAAGCACAAGCTGATGTTGGTCATGTCAAAAGGGAGACATGTAGAAGAGCAGTGCTGAATGTTTCTGGTCTTCAATCAGAGAATGGGAAAGCTGGTCCAGTCTCAATAACTGTCCCAGATCCTGACTTTCATGACTTCGATAAAGATAGGGCAGAGGAATGCTTCAAGCCAAAGCAAATATGGGCCTTATATGACGAGGAAGATGGAATGCCGCGGTTGTATTGTCTGATCCGTGAGGTTATATCTGTCAATCCATTTAAGATTCATATCAGTTACTTGAACTCCAAAACTGATAGTGAGTTTGGCTCAGTAAACTGGCTTGATTCAGGTTTTACCAAATCTTTAGGAAATTTCAGGGCTTGGAATTCTGATGTTGTTGACCAAGTTAACATATTTTCTCATGTTCTAAGCCAGGAGAAGGCCGGTCGAGGTGGTTGTGTTCGCATATATCCCAGAAGTGGAGATATCTGGGCTGTTTATCGAAATTGGTCACCAGATTGGAACAGATCTACACCAGACAAAGTGAGGCATCAGTATGAAATGGTGGAGGTGCTGGATGATTACTCTGAGGAACTTGGTGTTTGTGTTACTCCCCTTATTAAGTTGGCTGGATTTAAAACAGTATACACAAGGAATACAGACAAAAGTGCCATAAAATGGATACCAAGAAGAGAAATGTTACGCTTTTCACACCAAGTGCCTTCTTGGTTGCTGAAAGAGGAGGCAAACAATTTGCCTGAACGGTGTTGGGACCTTGATCCAGCTGCAACTCCAGATGAGCTTCTTCATGCTGCTGCTACAGAAGCAAATGCTTCTTTGTAG 2154 0.4262 MEANKEEALKAIENAEKRFSQRDFAGAKNYAVKAKTLCPELEGLSQMVATFEVYIASEVTHNGELDYYSILGLKPSADKEAVKRQYKKMAVLLHPDKNKCVGADGAFKLVSEAWTWLSDSTMRSSYDLKRNGQSGGINHTNLSSVHATGATVYNKCSNLTTSRSGLDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFVAVETGAAPANGSFPYCPWSYVPGNGYGSHSFDGVTYVPTNATYFNGNGVTGYHSGHGHGHGHGHGYEYVSNASFQWGSAGVIHQNGSTTLPADSVYQANGNVNVKRGRPKLKSGPDGRHHVAETVANINSDVSFSCNEPQEVKASRPDKKRKVVAGANFRNGYEEKGSKCASEAMVSNGNDGVGHGQKLSCTNEVQTKQCFMPPPFDARKLLIEKARTEIRKKLEEMKLSSEAAVAATLNEREKAQADVGHVKRETCRRAVLNVSGLQSENGKAGPVSITVPDPDFHDFDKDRAEECFKPKQIWALYDEEDGMPRLYCLIREVISVNPFKIHISYLNSKTDSEFGSVNWLDSGFTKSLGNFRAWNSDVVDQVNIFSHVLSQEKAGRGGCVRIYPRSGDIWAVYRNWSPDWNRSTPDKVRHQYEMVEVLDDYSEELGVCVTPLIKLAGFKTVYTRNTDKSAIKWIPRREMLRFSHQVPSWLLKEEANNLPERCWDLDPAATPDELLHAAATEANASL. 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00114 717 SUPERFAMILY Chaperone J-domain 58 131 IPR036869 -
Seca7g00114 717 PANTHER BNAC03G44070D PROTEIN 1 702 - -
Seca7g00114 717 Gene3D DnaJ domain 55 148 IPR036869 -
Seca7g00114 717 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Seca7g00114 717 Pfam Domain of unknown function (DUF3444) 479 685 IPR024593 -
Seca7g00114 717 CDD DnaJ 66 119 IPR001623 -
Seca7g00114 717 Pfam DnaJ domain 66 127 IPR001623 -
Seca7g00114 717 Coils Coil 414 434 - -
Seca7g00114 717 PRINTS DnaJ domain signature 86 101 IPR001623 -
Seca7g00114 717 PRINTS DnaJ domain signature 68 86 IPR001623 -
Seca7g00114 717 PRINTS DnaJ domain signature 102 122 IPR001623 -
Seca7g00114 717 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00114 Seca-Chr7 1474260 1478173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00114 4 316 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.313 3.67e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00114 - - gmx:100792639 1231.08