Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00113 ATGGAGTACCTTTTTGGCTTTGCGTCCTCCATTTCAAGAGACTTGGTATGCGGAGCAGTAGATCAATTAAGATACCCTTGCTGCTTCAATAATTTTGTTGAAGACCTTGCAAAAGAAAAGGCCAATTTGGTCACAACAAGAGATAGTGTCCAAGACCGTGTTGCACATGCCAAGAAACAAACTAGAAAGACTGCTCTAGTTGTTGATAAGTGGTTGAATGATTCTAACACTGACATAGACAACGTTAATAAGTTACTAGAAAAGGCAACAACAAAAGGAAAAAATGGTTCTTGTCTTGTACACTGTCCAAATTGGATTTGGAGATACAATCTGGGAAGGAAGTTGGCAAAGAAGAAATGTGACATTAAAACGTGCATTCAAGAAGGTAGACAGTATATACAACTTGAATACCCTGCTTCACTTAGAGGCTATTTTTCTTCTGAAAAATGTTGGGAATTTGATAGCAGAAAATCTGCTTGTGAGGAGCTTATGAATGCACTGAAAGATGATGAGGTTACCATGATTGGATTGTATGGAATGGGGGGTTGTGGGAAAACAATGTTGGCAATGGAAGTAATGAAGAGAGCAAGTCATCTCTTTGAACAAGTGCTTTTTGTGCCTGTCTCTAATGCTGTTGAAGTGCAGAGGATCCAAGAAAAAATTGCAAGCTCTCTTGAGTTTGAATTCCAAGAAAAACATGAAATGGATAGATCCCAACGCTTGTGCATGAGGTTGACTCAAGAAGATAGGATCCTTGTGATTCTAGATGATGTGTGGGAAATGCTTGATTTTGATGCCATAGGGATTCCTTCTAAGGAACACCATAAAGGTTGCAAGGTTCTTATTACCACTCGATCTGAAACCATGTGTGTTTCCATGAACTGCCAAAAAATGATTCACCTATCAACCTTAACCAATGATGAAACGTGGGAAATTTTCCAAAAGCATGCACTCATATCTGAGGGCACTTCCTTTAGTGTAAAGCATTTGGCAAGAGAAATTTCTAATGAATGTAAAGGACTTCCTGTTGCCATTGTAGCTGTAGCTAGCAGTTTGAATGGCAAGGCTGAGGTGGAATGGAAGGTTGCATTGAATAGATTGAGAAGTTCCAAACCAGTGAATATTGAAAAAGGTTTGCAAAATCCTTACAAGTGCTTGCAGTTAAGCTATGATAATTTGGACATGGAAGAAGCCAAGGCACTTTTCTTGTTGTGTTCTGCATTTCCTGAAGATTATGAAATTCCAGTTGAAATTTTAACCAGATCTGCAATAGGGCTAGGCATAGTTGGAGAAGTTCACTCATATGAAGAGGCAAGGAATGAAGTCAGTGCAGCTCAAAATAAGCTCATAAGTTGTTGCTTGTTGTTAGATGTTGATGACAGAAAGTGTGTCAAAATGCATGACTTAGTTCGCAATGTAGCCCACTGGATTGCAGAGAATGAGAATAAGGTGATTAAGTGTGAGTTGGAAAATGATGCAACTTTGGAACATTCTTCATTGAAGTATCTATGGTGTGAGAAATTTCCACATGATTTGGATTGTTCCAATCTGGAGTTTCTACACATGCACACATATTCAGAAGTATCAGATGAAATTTTTAAAGGAATGAGAATGCTCAGGGTTTTGCTTCTTTACAACAAGGACAGGGAGAGAAGGCCCCTGTTGACAATGTCATTAAAATTGTTGACAAACCTTCGTTGCATACTCCTAAGTAAATGGGAATTGGGTGACATCTCATTTGTGGGAGATATAAAGAAACTTGAAAGTCTTACATTGTGTGATTGTTCATTTCTTGAATTACCTGATGTAGTTACACAAGTGACAAACTTGAGATTGCTGGATTTGTCAGAATGTGATATGAAAAGGAACCCTTTTGAAGTGATCAGAAGGCACCCACAACTGGAAGAATTGTACTTTGCTGATCGTCGATCAAAATGGGACAATGGATACACAACTGAATTCTTCAAAAAGTTTAGTGTTCCCCAAGTATTGCAAAGGTATCAAATACAATTAGGAACCACGTTTGCAGGTTTCCAAGAAGAGTTTCTCAATCATCATAGAGCTTTGTTTCTCAGTTATTTGGATCCATCTAATGCAGCAGTTAGAAATTTGGCCAAAAAGGCAGAGGTTTTGTGTATAGCAGGTATTGAGGGAGATGCTAAGAATATTATCCCTGGCATATTTGAACTAGAAGAAGGAAGCATGAATCATTTGATTGAGCTTCTGATACGTGATTCTGAGGAAATAGAGTATTTGGTTGACACTAGCAATCATTTGAGTGAGGTAGGAACTCTCTTCTCCAAGTTGCATTGGCTAAGAATAGAAAGCATGAGGCATTTGGGAGCTTTATACCATGGCTGTCTTCCTGCTAGTGGTCATTTTGGGAAATTAGAGGATCTATATATAAGTGATTGTCCAAAGCTGACATGTCTGTTCACAGTTGCGGTTGCTCAAAATCTGGCACAGCTGGAGAAATTAGAAATATTATCCTGTCCTTCGCTGAGGCATATACTGACTGATGACAACAGAGAGGAGATAAGCACAGATGATCACAGTCACAGGTTGCTGTTTCCAAAATTAAAAAAGCTCCATGTCAGAGAGTGCAGCAAGCTGGAATATATAATCCCAATCACTTTTGCTCAGGGCCTTGTACAATTGGAGTGTTTGGAAATTGTATGTAATCAAGAGTTGAAATATGTATTCAGACAATGCACACATAGAGATCAGGTGGCAGGTCAGAGTGAAAATGAACTGAAGACTGAGCTTTCTGCCCTGGAAGAGCTTACTCTTATTAACTTGCCAAATATCAATAGCATTTGCCCAGAAGATTGTTATCTAACTTGGCCATCTCTGCGTCAGTTCAGTTTGCAAAATTGTCCAGAGTTTTTCATGGTGTCTATCAATACTTGCATGGCTTTACATAACAATCAGATAATCAATGAAGCTTCACATCTAACTGTGAAAAATATAAAAGAAGTTCGGGTCAATAACTGTGAGTTAGAAGGTATCTTTCAACTGGCAGGACTACCAATTGATGAAGAACAAGATCCATTGAAATCATGTTTGGAAACGTTGTATTTGGAGAATCTACCTCAGCTCAGGTATATATGTAAGAGTGATGTAGAATCCACAAGCCTCCAATTCCAAAATCTTCAACAAATGGAGGTTATTGGATGTAGAAGATTAAAATCTATCTTCTCATCCTGTATGACAGGAGACCTACCTCAACTAAAAGAACTGAAGATAGAAAATTGCAATCAGCTAGACCATATCATTGAGGACATGGGCACTGCAATCCCATCAGGATCATTTAGTCTGCCCAGCCTTACAAGGTTAACGATAAAATCATGTCCTATGCTGGGTTCATTGTTCACAGCATCCACTGCTAAAACCTTGACTACATTGGAAGAATTGACAATACAAAATTGCCATGGTCTAAAGCATTTATTAAGTTATGGAAAAGCTCAACAAAATAAAAAGGAAGATATAGTTCAGAATGATCATGACCTTTATATGCCAATGTTCCCTAGTTTGAAAAGGCTGAGTATTATGAGATGTCACTTGCTGCAGTATATACTACCCATCTCATTTGCCAGAGGCCTGGTGAAATTGGAAGCTATAGAAATTACAGAGACTCCTGAGTTGAGATATGTATTTGGTCAAAACATTCGTTCTTCCCATCAATACCAAAACAAGTTCCAAATTGAGCTTCCTGTTTTGGAAAAAGTTACACTCTACAGTACACCAAATATGATCGCCATTTGCCCAGAAAACTGCCATGCAACATGCTCATCTTTGCAGCTGCTTGTCATGAACGAAGGTGGACTGTCTATAAATAATTTAATGGTTGATTCAGAAGCCATGCATTCGGATCATAGTTCTAAAACAGATGAAGGGGAAACAAGTATGGCAATTGAGAAAAAGTTAGTATCGATTATTATTGAGAACAGCTCCAAAATAGAAGGCATTTTTTATCTGAAGGGATTTCCTGTCAATGGACAACAAGTGACTTCTTGGTTAGAAGACCTAAAATTGGTGAATTTACCAGAGCTAATGCACATATGGATGGGTGCCAAACATTTTGTGAGACTTCAACATCTTCATAAACTACACATTTGCAATTGTCCAAAACTAAAGGCTATCTTCTCTGCCTCCATCTTGAGAATCCTACCTCTTTTGAAGATCCTAGTGGTAGAACAGTGTGAGAAATTGGAGCAAATCATTGAGGATGAAGAAGAAAATGACAACGTCCAGAATCCTCAATCCCCAAAAGTATGCTTCTCACAGCTAAAGTTCCTTTGTGTCACACACTGCAACAACTTGAAGCATCTGTTTTATATATCCAACTCCTACGAGTTTCCAGAACTGGAGTATCTGATCCTAAACCAAGATTCTTGTCTAGTGCAAGTGTTTAAAGCTGAACCAGGTGTGAAAGAAGGGAGGGTGGAAGTTTTGTTTCCAAAACTGAAGCATGTAATGTTAACACATCTGCCAAGCCTCAATAATATCTGTCAAGGGATTGAGTTTCAGACTCTGACTAATCTTCTTGTGCACAACTGTCCAAAATTGTCGCTAACTCCATCGACTACTGTACAGGACATGCTACAAACCTCTGATCCTGATAAGGAAATTGAATTCTATCTCCGTCCTCACTTATACGACATAAGTGGTATTATAAGAAATGGCCACAAGTTCCTTGCATCAAAGAAAGAAAACAACGAGACACGAGACTTAGAATCGCAGGAGCAGAAACTGCCACCCATTCCTTTACCGAACTTGACAGAGGAGTTGGTTGGCACACAATCAGAATCAATGGATGAACCATGTTTGATGAACCAACAAAAGCCACTTGGAGAATCTGTAAGTACCGTTGAAATTCCTCAAACAATGTAA 4893 0.3869 MEYLFGFASSISRDLVCGAVDQLRYPCCFNNFVEDLAKEKANLVTTRDSVQDRVAHAKKQTRKTALVVDKWLNDSNTDIDNVNKLLEKATTKGKNGSCLVHCPNWIWRYNLGRKLAKKKCDIKTCIQEGRQYIQLEYPASLRGYFSSEKCWEFDSRKSACEELMNALKDDEVTMIGLYGMGGCGKTMLAMEVMKRASHLFEQVLFVPVSNAVEVQRIQEKIASSLEFEFQEKHEMDRSQRLCMRLTQEDRILVILDDVWEMLDFDAIGIPSKEHHKGCKVLITTRSETMCVSMNCQKMIHLSTLTNDETWEIFQKHALISEGTSFSVKHLAREISNECKGLPVAIVAVASSLNGKAEVEWKVALNRLRSSKPVNIEKGLQNPYKCLQLSYDNLDMEEAKALFLLCSAFPEDYEIPVEILTRSAIGLGIVGEVHSYEEARNEVSAAQNKLISCCLLLDVDDRKCVKMHDLVRNVAHWIAENENKVIKCELENDATLEHSSLKYLWCEKFPHDLDCSNLEFLHMHTYSEVSDEIFKGMRMLRVLLLYNKDRERRPLLTMSLKLLTNLRCILLSKWELGDISFVGDIKKLESLTLCDCSFLELPDVVTQVTNLRLLDLSECDMKRNPFEVIRRHPQLEELYFADRRSKWDNGYTTEFFKKFSVPQVLQRYQIQLGTTFAGFQEEFLNHHRALFLSYLDPSNAAVRNLAKKAEVLCIAGIEGDAKNIIPGIFELEEGSMNHLIELLIRDSEEIEYLVDTSNHLSEVGTLFSKLHWLRIESMRHLGALYHGCLPASGHFGKLEDLYISDCPKLTCLFTVAVAQNLAQLEKLEILSCPSLRHILTDDNREEISTDDHSHRLLFPKLKKLHVRECSKLEYIIPITFAQGLVQLECLEIVCNQELKYVFRQCTHRDQVAGQSENELKTELSALEELTLINLPNINSICPEDCYLTWPSLRQFSLQNCPEFFMVSINTCMALHNNQIINEASHLTVKNIKEVRVNNCELEGIFQLAGLPIDEEQDPLKSCLETLYLENLPQLRYICKSDVESTSLQFQNLQQMEVIGCRRLKSIFSSCMTGDLPQLKELKIENCNQLDHIIEDMGTAIPSGSFSLPSLTRLTIKSCPMLGSLFTASTAKTLTTLEELTIQNCHGLKHLLSYGKAQQNKKEDIVQNDHDLYMPMFPSLKRLSIMRCHLLQYILPISFARGLVKLEAIEITETPELRYVFGQNIRSSHQYQNKFQIELPVLEKVTLYSTPNMIAICPENCHATCSSLQLLVMNEGGLSINNLMVDSEAMHSDHSSKTDEGETSMAIEKKLVSIIIENSSKIEGIFYLKGFPVNGQQVTSWLEDLKLVNLPELMHIWMGAKHFVRLQHLHKLHICNCPKLKAIFSASILRILPLLKILVVEQCEKLEQIIEDEEENDNVQNPQSPKVCFSQLKFLCVTHCNNLKHLFYISNSYEFPELEYLILNQDSCLVQVFKAEPGVKEGRVEVLFPKLKHVMLTHLPSLNNICQGIEFQTLTNLLVHNCPKLSLTPSTTVQDMLQTSDPDKEIEFYLRPHLYDISGIIRNGHKFLASKKENNETRDLESQEQKLPPIPLPNLTEELVGTQSESMDEPCLMNQQKPLGESVSTVEIPQTM. 1631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00113 1630 FunFam Probable disease resistance protein At1g61300 153 298 - -
Seca7g00113 1630 Gene3D Ribonuclease Inhibitor 1164 1539 IPR032675 -
Seca7g00113 1630 Gene3D - 144 300 IPR027417 -
Seca7g00113 1630 Coils Coil 33 53 - -
Seca7g00113 1630 Gene3D Ribonuclease Inhibitor 479 659 IPR032675 -
Seca7g00113 1630 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 981 1149 - -
Seca7g00113 1630 Coils Coil 72 92 - -
Seca7g00113 1630 Gene3D Ribonuclease Inhibitor 857 1153 IPR032675 -
Seca7g00113 1630 Pfam NB-ARC domain 158 392 IPR002182 GO:0043531
Seca7g00113 1630 Gene3D - 303 388 IPR042197 -
Seca7g00113 1630 Coils Coil 1394 1414 - -
Seca7g00113 1630 MobiDBLite consensus disorder prediction 1571 1592 - -
Seca7g00113 1630 Gene3D Ribonuclease Inhibitor 702 840 IPR032675 -
Seca7g00113 1630 PRINTS Disease resistance protein signature 174 189 - -
Seca7g00113 1630 PRINTS Disease resistance protein signature 605 621 - -
Seca7g00113 1630 PRINTS Disease resistance protein signature 338 352 - -
Seca7g00113 1630 PRINTS Disease resistance protein signature 245 259 - -
Seca7g00113 1630 SUPERFAMILY L domain-like 458 900 - -
Seca7g00113 1630 Gene3D - 389 476 IPR036388 -
Seca7g00113 1630 SUPERFAMILY RNI-like 1028 1463 - -
Seca7g00113 1630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 405 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00113 Seca-Chr7 1464762 1472822 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00113 171 618 WRKY Transcription Factor Family AT5G45050 22.417 5.28e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00113 - - cam:101501248 2393.23