Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00098 ATGGTTTCTTCAGACGAAAGTGCTGATCACAATGTTTCTTCTGATGATAAAGTACAGCAGGGAGTGAGTCCTCATAGCGATATTAAATTGTCACAAGGGATTCATGAAACTAAAATTCATTTGTCCAAATCAGAGAGGGCAAGAACTATTCCTTCTATTGTAGCTAAAAAACAAGTGAAGGATTCTGATGCTACTGCTCATGCCTTGCAATCAGAAACATTTGAGAAACATTTGCAGAGTCCTGATACTCTTTCACATGAATTGCCTACTTTGCAATCTGGTCAGGACAGTCCCTCTATAATACGTGAAAAGGTATCAAAAGATGGCTATAACTGGCGGAAATATGGCCAGAAACATGTTAAGGGGAATGAATTTATAAGGAGCTATTACAAGTGTACACATCCTAACTGCCAAGCTAAAAAACAATTGCAGCAGTTAAATAATGGGCACATTACAGATTCTATTTGCATCGGTCAGCATAATCATCCTAGACCTCAATCAAACAACATACCACCACTTGATTCTGTTCTGCCTGTTGTTGAACAAGGACCACACAAACCCTCTTTAGCCAATGTGGAAGGCATCATACATGTAGACAAATCATTTGTTGAGCATGGATGTATGCCTCTACAGATCAAACCTTTAGATTCTCTTCCAGCTTCAAAAGTTTCCCCAGCTGATGAGTTGAAAGCAGCAGATTTACAACTGACAGTAAAGGATGAGGTTCACAACAATGAAGATCCTGAGCCAAAGCGGCTGAAGAAAGACAATAGTAATGCTGATGTCACTAGAACTGATGTGTCAACTCGTGAATCTCGTGTTGTTGTTCAGACTTCAAGTATGGTTGATTTTGTAAATGATGGGTATCGCTGGCGCAAATATGGGCAGAAACTAGTTAAAGGGAATACAAATCCAAGAAGTTATTATCGATGCTCAAATCCTGGATGCCCTGCCAAAAAGCATGTGGAAAGGGCCTCTCATGATTCAAAAATTGTAATAACAACCTATGAGGGACAACATGATCATGAAATCCCCCCTGGAAGGACTGTCACTCATAATGCAGCTACAAATACTCACACAATGGCCACCGATGGCAAGCTGGGAACCAAATCTGGAGGTAATAATACAGGGGAACGCAGCTGCTTGGACTCAAAAAGCAGATCAAATGAGCAACTAAATAAGGAGTCAATTACTAAATCAAAGGATGGTGATATGGCTGAGTTTGGTATGATCAGCCTTTGTGATGAGGGTCCTGAAAGTAAATTAAGCGAGAAAGAACAAAAAAGTGATGACTCAGGTACCAAAGACGATTCTATCAGCAATGACATCATATGCCATTCAGGTTCCAAAGTTCCTTGTAGATCAAATGAACAGCTGAAAGATGAGGTAAATACTACAATAGAAGGAAGTAAGGATTGCCTTAATGTGGTTGCTGGTTGTGATACTCCTAATACAGAAAGTGAATTTAATAAGCAATCAACATCTGATGCAGAACCTGTCCAAAGCTAA 1509 0.3976 MVSSDESADHNVSSDDKVQQGVSPHSDIKLSQGIHETKIHLSKSERARTIPSIVAKKQVKDSDATAHALQSETFEKHLQSPDTLSHELPTLQSGQDSPSIIREKVSKDGYNWRKYGQKHVKGNEFIRSYYKCTHPNCQAKKQLQQLNNGHITDSICIGQHNHPRPQSNNIPPLDSVLPVVEQGPHKPSLANVEGIIHVDKSFVEHGCMPLQIKPLDSLPASKVSPADELKAADLQLTVKDEVHNNEDPEPKRLKKDNSNADVTRTDVSTRESRVVVQTSSMVDFVNDGYRWRKYGQKLVKGNTNPRSYYRCSNPGCPAKKHVERASHDSKIVITTYEGQHDHEIPPGRTVTHNAATNTHTMATDGKLGTKSGGNNTGERSCLDSKSRSNEQLNKESITKSKDGDMAEFGMISLCDEGPESKLSEKEQKSDDSGTKDDSISNDIICHSGSKVPCRSNEQLKDEVNTTIEGSKDCLNVVAGCDTPNTESEFNKQSTSDAEPVQS. 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00098 502 ProSiteProfiles WRKY domain profile. 101 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g00098 502 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 365 IPR044810 GO:0003700
Seca7g00098 502 Gene3D WRKY domain 272 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g00098 502 SMART WRKY_cls 285 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g00098 502 SMART WRKY_cls 106 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g00098 502 MobiDBLite consensus disorder prediction 383 402 - -
Seca7g00098 502 ProSiteProfiles WRKY domain profile. 280 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g00098 502 MobiDBLite consensus disorder prediction 242 261 - -
Seca7g00098 502 MobiDBLite consensus disorder prediction 1 27 - -
Seca7g00098 502 FunFam WRKY transcription factor 57 271 345 - -
Seca7g00098 502 Pfam WRKY DNA -binding domain 107 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g00098 502 Pfam WRKY DNA -binding domain 286 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g00098 502 SUPERFAMILY WRKY DNA-binding domain 279 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g00098 502 Gene3D WRKY domain 98 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g00098 502 MobiDBLite consensus disorder prediction 242 266 - -
Seca7g00098 502 MobiDBLite consensus disorder prediction 358 457 - -
Seca7g00098 502 SUPERFAMILY WRKY DNA-binding domain 102 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g00098 502 MobiDBLite consensus disorder prediction 76 100 - -
Seca7g00098 502 MobiDBLite consensus disorder prediction 31 45 - -
Seca7g00098 502 MobiDBLite consensus disorder prediction 358 382 - -
Seca7g00098 502 MobiDBLite consensus disorder prediction 1 48 - -
Seca7g00098 502 FunFam WRKY transcription factor 95 166 - -
Seca7g00098 502 MobiDBLite consensus disorder prediction 418 437 - -
Seca7g00098 502 MobiDBLite consensus disorder prediction 438 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00098 Seca-Chr7 1341682 1345728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00098 90 353 WRKY Transcription Factor Family AT2G04880 47.970 2.14e-83 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g00098 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00098 K18834 - gmx:100781219 706.827