Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00096 ATGCCTGCTGAGAACTCGAACAGTTGGGAAGGGGAAGTGGAAGCGTTTGTTGAAGTTGATCCAACGGGGAGGTTTGGGCGTTACAGTGATCTGCTTGGGTTTGGAGCTGTGAAGAAGGTTTATAGGGCGTTTGATCAAGAAGAAGGTATTGAGGTGGCATGGAATCAGGTTCGTCTCAGGAATTTCAGTGAAGATCCTGTTCTCATAAACCGGCTTCATTCTGAGGTTGAGTTGCTCAGAACTCTCTGCAACAAGTATATCATTGTTTGTTACAGTGTTTGGAAAGATAATGACCGTGGCAATATCAATTTTATTACTGAGGTCTGCACTTCTGGGAATCTTAGGGATTACAGGAAGAAGCACCGCCATGTCTCCATTAAGGCTTTCAAGAAATGGTCTAAACAAGTCCTTGAGGGGTTAGAGTATCTTCATACTCATGACCCCTGCATTATTCACAGAGATCTCAATTGCAGTAACATCTTTGTTAATGGGAACATTGGCCAGGTGAAAATTGGTGATCTTGGATTGGCTGCAATAGTGGGAAGGAGCCATGCAGCACATTCAATTTTAGGGACACCGGAATATATGGCACCAGAGCTGTATGAGGAAGATTACACTGAGATGGTGGACATATATTCTTTTGGAATGTGCTTGCTTGAAATGGTTACAATGGAGATACCCTACAGTGAATGTGACAGTGTCGCCAAGATATACAAAAAGGTCACAATGGGAATTAAGCCTCAGTCATTGAGCAAAGTCACAGATCCAGAGGTCAAGGCGTTCATTGAGAAATGCATAGCACAACCAAGAGCAAGACCTTCAGCCACGGATCTTCTTAAGGATCCTTTCTTTTATGAACTCAACAATGATGAAGAATCAACGCTACTCAATTGA 894 0.4295 MPAENSNSWEGEVEAFVEVDPTGRFGRYSDLLGFGAVKKVYRAFDQEEGIEVAWNQVRLRNFSEDPVLINRLHSEVELLRTLCNKYIIVCYSVWKDNDRGNINFITEVCTSGNLRDYRKKHRHVSIKAFKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRSHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTMGIKPQSLSKVTDPEVKAFIEKCIAQPRARPSATDLLKDPFFYELNNDEESTLLN. 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00096 297 FunFam Probable serine/threonine-protein kinase WNK1 11 107 - -
Seca7g00096 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00096 297 CDD STKc_WNK 24 284 - -
Seca7g00096 297 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00096 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 287 - -
Seca7g00096 297 SUPERFAMILY Protein kinase-like (PK-like) 19 284 IPR011009 -
Seca7g00096 297 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Seca7g00096 297 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Seca7g00096 297 FunFam probable serine/threonine-protein kinase WNK9 109 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00096 Seca-Chr7 1336392 1337363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00096 4 284 MAP Kinase Kinase Kinase AT5G55560 75.801 6.18e-168 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Seca7g00096 Pkinase 3.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00096 K08867 - gmx:100798280 575.474