Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00092 ATGTTTGACTCACATGGGTCCTTTGTGTTGCAGGCTGGTGATTCTACCCCTGAGGAACTTGCAAATGCCACACAAGTCCAGGGTTCATACTTGCCCATTGTGAGGGAGAGGCCATCTGTAGAGCTTGTTAAGGTTACAGATGAAATGAAGGAGTTTAAAGCTTATTACAAGCTGCGGCTTGAACGCACCAACAAACGCCATTATGGTGCTAGACTGAAGAAGGCTGCTGAAGCAGAAAAGGAAGAGAAGAAGTAA 255 0.4588 MFDSHGSFVLQAGDSTPEELANATQVQGSYLPIVRERPSVELVKVTDEMKEFKAYYKLRLERTNKRHYGARLKKAAEAEKEEKK. 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00092 84 FunFam 60S ribosomal protein L13 43 84 - -
Seca7g00092 84 Pfam Ribosomal protein L13e 11 62 IPR001380 GO:0003735|GO:0005840|GO:0006412
Seca7g00092 84 PANTHER 60S RIBOSOMAL PROTEIN L13 11 84 IPR001380 GO:0003735|GO:0005840|GO:0006412
Seca7g00092 84 Gene3D - 44 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00092 Seca-Chr7 1308307 1308561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00092 10 69 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 78.333 8.11e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00092 K02873 - gmx:100805957 117.472