Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00091 ATGGTTAAGCATAACAATGTTATCCCTAACGGACACTTCCGTAAGCATTGGCAAAACTATGTGAAGACCTGGTTCAATCAACCAGCACGGAAGACAAGAAGACGCCAAGCCCGTCAAAAGAAAGCTGTGAAGATTTTCCCCAGGCCTACTGCTGGACCTCTTAGGCCAATTGTTCATGGACAAACCTTGAAATACAACATGAAAGTCAGAGATGGTAGAGGATTTTCTCTTGAAGAGCTGAAGGTAAAATTCACTTTTTCTTATATGATAAATTGA 276 0.4094 MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTRRRQARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKVRDGRGFSLEELKVKFTFSYMIN. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00091 91 Pfam Ribosomal protein L13e 7 81 IPR001380 GO:0003735|GO:0005840|GO:0006412
Seca7g00091 91 PANTHER 60S RIBOSOMAL PROTEIN L13 1 82 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00091 Seca-Chr7 1306782 1307668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00091 2 82 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 88.889 2.31e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00091 K02873 - gmx:100499935 159.073