Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00082 ATGCTGTCCAGCAATGAAGAAAAATATGTGTCTCTCAACAATCTATCCACCAACCCAGATAATCTGAACATAAAAGTGAGGATTTCACGTATATGGGACACACTCAACATACATCGAAAGAAAGAATTAATTAGCACAGACATGGTGCTAATTGATGAAAAGAGCAATTACATACATGCTTCTATAGGGAGAAATATTGCTCATAAGTTCAAGCCTCTTCTAAAGGAAGGAAAAATTTACACCATTAAAAATTTTGAGGTGACAAACAATAAAGAAAAATTCCCAGTGGTCCAAAAGAACCCTTCAATGTTACATTTTTATGCCACAACAATTGTGAAAGATGCAGGTTGTGATGAAAGCATCATTCCTCACCATGTTTTTGAATTTGTTAATCTTGATGATTTACAAAGTCGGTGTGGAAAGGATGTGTTGACAGATGTGATTGGAGTTATCACAAAAGTTGGTCCAATTGAAGAGAAGAGGACTATTGGGGGCAGCGTTGATACCTTGACACTTCACTTACAAGACATAAGGGATTCAAGTGATGAACCTATAGTTGGTAACTTTGAGGTGTCAAAGGATGGTGTCTGTCCTAAAACAGTGAAGACTATAGCTGAACTTCTGTCCATGGCAAGTTTAAAGAGTAATACGGCTGATAGGACAACTACAAATTTCAGTTGTCAACATTGCCACAAAGTTGTTGAGTATCCAATGACAAGGTTGCGTTTGGAGCTTGATGTCAAAGATTCAACAGATTCTACCATATTTGTTCTATTTCATGAAGTTGCTGAACAATTAACACAATTGAACTTAGGAGACCATGCCACAACCTTTGAAAATGAAAATGGTGATGATTTGAACCTGCCACCCCAACTCCTAAAAATCATAGGTACTACCCATGTCTTCCAAATAAAAATGAGCACCTATTTTGAAAGCTATGGAAGGCGCAGTTTCACATCAAATAAAATTCTCAAGCCAGTTGTTAAGATTGAGGACGAAGATACGAAAGAAACCTCAGGTGCCAAATCAAAGGAAAATACATTGGAAAAGATTGCTTCTTCCTTAAATGGATCTTCAGATGCAAAAAAAAAAAATTCACCACAAAAGAGGAGAAAGTTAAGTTTTCATTCTAAAGACATGAATCAAAATTCAGAAAGCACAATGTTATGTAATCAACAAGTCACAGGAGAAAGAAACATAAAAAGAAAGAAAAATGAAAGAAATAAAGCACCTTTGCATTTACTGGAACACATAAATGGTGACGGACCAACTTATATGGATCTTGGACCTCCAAATTTTGCATGTGAAGAATGTGAAAGCACCATGTGGTATGAAGAAAGAACAGATAAACCACATCGACCAAAAAAACCAAAATTTTCTATATGCTGCCAACGAGGAAAAGTAAAACTGCCTATTCTTGAAGAACCACCAGAAGCTTTGAAAGCACTTTTAAGTTTTGAAGGCGGTCGACACTCTATGAAGTTTAGGGAAAAAATAAGAGCGTATAATTCTATTTTTGCTTTCACATCCATGGGTGCTAAAATAGACAACACAGTCAACTTACGGCCTGGTCCTTATGTGTTCAAAATTAGTGGTCAAAATTATCACAGAATTGGAGGACTCATACCTGAAGAAGGAAATCAGCCAAAGTTCTCCCAGCTTTATGTCCATGATACTGAAAATGAAGTCCAAAATAGACTACGTTCCTTAAATCATGGCAAAATTGCTGAGGATCTTGATCCAACTATTGTTCAAAGCTTAAAAGAAATGCTTGATATGTATAATCCCATTGCCCAAGTATTCAGAATGGCAAGAGACAGATTATCTACATCTCAAACAAACAATGTACATATCAAGTTACTTGGAACAAGATCAATAGAATCGCGGCAATATAACAAACCCTCCTCAACAGAAATTGCAGCTCTAATTGTTGGAGATTTGGGACAATCAATTGGAACAAGAGATGTAGTAATAGAGCATAAAACAGATGGCCTCCAAAGAATATCAGAGTTACAACCTTCATTTATGGCTATGCAATATCCATTATTATTTCCATATGGTGAAGATGGGTTTCACTTAGACATTTCTTATTGTCAAAATGATGGGGGGAATAAAACAAAGCGAGAAAATGTGACAATGAGAGAATATTACGCATACCGCATACAACAAAGAGGCTTAGAGGCAAAGACTCTTATTTCCGCCGGTCGATTATTCCAACAATATATTGTTGATGCATACACGGCTATAGAAGAAGATCGATTGAGATGGATTAAACAAAATCAAACAGTGCTACGCACGGAGTTGTACAAGAATGTATGTGATGCAGTAGTTCGTGGAGATACTATTGCTGCTGCTACTGGTAAGAGAATTGTTTTACCTTCTTCTTTTACAGGTGGTCCTCGATATATGGTCCAAAACTATCAAGATGCTATGGCTATATGTAGAACCTTTGGAAATCCAGATATTTTCATGACATTTACTGCCAATCCAAAGTGGCCTGAGATTCAGTATATACTTCATCAAGTTCCACGACAATCAGCTGATGATAGACCAGACATTAAGACTAGAGTCTTCAAGATGAAAGTTGATCAACTAATGAAGCACATAGTTGAAGGACAATATTTTGGTCAAACTATATCAGTCATATACACAATCGAGTTCCAAAAAAGAGGCCTACCTCACGCTCACATTTTGTTATGGCTGCACCAAAGTAATAAATATCCAACCCCACAGGATATTGATAGAATAATAACAGCAGAATTACCATCTCAAGAAGATGATCCAATGGGTTTTAATGCTGTCACACAATTCATGTTGCATGGACCATGTGGAAGTGGAAACAAAAATGCACCTTGCATGGTTGATGGTTTTTGCAGCCGAAATTACCCCAAAAAATTCAGTAATGAAACAACCATAGACAAGGATGGCTTTCCTACTTATAGAAGGAGGGATGATGGAAGATATGTGAAAAAAGGAGATATCAACTTAGACAACCAATTTGTTGTTCCATATAATAGGGATTTATTGCTAAAATTCCAGGCACACCTAAATGTTGAATGGTGCAATAAGTCCAGAGCTATCAAGTACCTCTTTAAGTATCTACACAAAGGGCTTGATAGAGCAACAATCCTAATAGAAGAAAATGTTTCTGTGTCAAACACATCAAACTCAACTGAGATAAGAGAAGTTGATGAGATCAAAACATATTTGGATTGCAGGTATGTCTCCGCATGTGAAGCATGTTGGAGAATATTTAATTTTGATATACATTATAGAAGTCCATCGGTAATGAGATTGACATTCCATTTACCCGGAGAAAACTCACTCATTCTAAGAGACTCCCAACCTTTGTCATCAGTCATAAGAAGAGATGGGATTGAACATACCATGTTTACAGAATGGATGAGGATGAATTCAATTAGTCCTGAAGCACGTACATTAACATATTCTGAATTCCCAACCAAATTTGTTTGGGATCAAAGAAAAAAAATATGGAAACAAAGGCAAATTGGGAGAACAATTGGAAGAATTTATTATGCACACCCAACATCTGGTGAAAGATATTACTTGAGAATTTTGTTAAATATTGTTCGAGGACCACAAAACTATGAACAAATTAGGACAGTGGGTGGTTTAATTTATACAACTTTCAAAGAAGCATGTTACGCTTTAGGGCTATTGAATGACGACAAAGAGTGGAATGTTGCATTGAATGAAGCAGCCCATTGGGCCTCAGGTTCTCAGTTGAGGGAGTTATTTGTCACTATTCTTCTTTTCGGTGAAGTAACAAATGTGGAACAATTTTGGAAAAACAGTTGGCAACTATTGTCTGATGATATTCTCTACAACAAAAGACGCTTATTTCATCATTTTAGTTTAGAGCTCACTGTTGAACAAATCAAAACATATTGCTTGATTGAAATTGAAAAGCTTTTAATCAAGAATGGGAAAGAGCTATCTGATTTCAATGGAATGCCTTTGCCAGATAAGTCAGCAGTGGAACCTATGGATAATAGACTAATTAGGGAGGAGCTGAATTATAATATTCAAGAATTGGAAAATGAACATAGAAGATGTTATCCATTACTAAATCAGGAACAAAGTGAAATATATAATGTTGTTATGCATGCTGTCAACACTAACACAGGTGGACTATACTTTGTCTATGGGCACGGAGGCACTGGGAAGACTTTTTTGTATAGGACAATCATTGCAAAACTCAGGTCAGAAAAAAAAATAGTGCTTGCTGTTGCTTCATCAGGTATTGCATCATTATTACTCCCTGGAGGCAGAACAGCCCATAGTAGATTTCAAATACCATTAGATATTTTTGAAAATAGCACTTGCTCAATCAAGCAAAATACTCAACTTGCTCAGTTAATGATTCAAACAGATCTCATTATTTGGGATGAGGCACCAATGACAAACAAATTAGCATTTGAAGCACTACATAGATCACTACAAGACATTGTTGGTTACAAGTATCCAGACAAAGCCACAGATCCATTTGGAGGAAAAACAATCCTTCTTGGCGGAGATTTTAGGCAAATATTGCCTGTAATAACAAAAGGACAAAGGCAGGACATAGTGCAAGCATGTATTAACAACTCTTATTTGTGGGATCATTGCAAAATGTTCAAGCTATGTAAAAGCATGAGAGTTAGTGATAATACTTCTTCGGGTGAACTAAACTCTTTAGCACGTGAGTTTAATACATGGCTTCTTCAAATTGGTGATGGAAAAATACCAACCATTAGTAGAGAAGGAGAAGAGGTTCCGTCATGGACAAGAATACCAAGTCAATACCTATTAAGCCCAATGGGTGATTCACTCAAACAAATTGTGGAAAGCACATATCCAAATTTACAACAACATCTATGGAATGAAGAATACCTCAGAGAAAGAGCAATACTCACTCCTTTAAATGACACTGCTGATGAAATCAACAATTATATTATTGACATGATTGAAGGATCGATAAAACAATATAGAAGCTCAGACGAGATTGACAAGGCAACTGACAACATTATCGAACAAGAGCTTATGTATCCGGTAGAATTTTTAAATTCCTTAAATTTTACTGGAATTCCAAATCATTGCTTGAACCTCAAAGAAGGAATGCCAATCATGTTATTAAGGAATATAAATCCAGCATTGGGAATGTGCAATGGAACAAGACTCCTTATCATGCATCTAGGAAATTGGATAATAGAAGCAAAAATAATTACAGGAACCAACATTGGTGCAAAGGTACTTATCCCACGAATAGTTTTAACAGCATCTGACTCAAAGTGGCCATTTGTCTTGCGAAGAAAACAATTCCCAATAAAGGTATGCTATGCAATGACAATAAACAAGAGTCAAGGACAATCATTGAACTACATGGGATTATATTTGCCAAAACCTGTATTTTGTCATGGACAATTATATGTTGCATTGTCAAGAGTCACTTCACCGTTAGGTTTGCGAATCCTTATTTTTGAGCAAGATGATAGATATATTGAGTACACTAAAAATGTTGTGTACCATGAAGTTTTTAATGGACTGCTTTGA 5553 0.3614 MLSSNEEKYVSLNNLSTNPDNLNIKVRISRIWDTLNIHRKKELISTDMVLIDEKSNYIHASIGRNIAHKFKPLLKEGKIYTIKNFEVTNNKEKFPVVQKNPSMLHFYATTIVKDAGCDESIIPHHVFEFVNLDDLQSRCGKDVLTDVIGVITKVGPIEEKRTIGGSVDTLTLHLQDIRDSSDEPIVGNFEVSKDGVCPKTVKTIAELLSMASLKSNTADRTTTNFSCQHCHKVVEYPMTRLRLELDVKDSTDSTIFVLFHEVAEQLTQLNLGDHATTFENENGDDLNLPPQLLKIIGTTHVFQIKMSTYFESYGRRSFTSNKILKPVVKIEDEDTKETSGAKSKENTLEKIASSLNGSSDAKKKNSPQKRRKLSFHSKDMNQNSESTMLCNQQVTGERNIKRKKNERNKAPLHLLEHINGDGPTYMDLGPPNFACEECESTMWYEERTDKPHRPKKPKFSICCQRGKVKLPILEEPPEALKALLSFEGGRHSMKFREKIRAYNSIFAFTSMGAKIDNTVNLRPGPYVFKISGQNYHRIGGLIPEEGNQPKFSQLYVHDTENEVQNRLRSLNHGKIAEDLDPTIVQSLKEMLDMYNPIAQVFRMARDRLSTSQTNNVHIKLLGTRSIESRQYNKPSSTEIAALIVGDLGQSIGTRDVVIEHKTDGLQRISELQPSFMAMQYPLLFPYGEDGFHLDISYCQNDGGNKTKRENVTMREYYAYRIQQRGLEAKTLISAGRLFQQYIVDAYTAIEEDRLRWIKQNQTVLRTELYKNVCDAVVRGDTIAAATGKRIVLPSSFTGGPRYMVQNYQDAMAICRTFGNPDIFMTFTANPKWPEIQYILHQVPRQSADDRPDIKTRVFKMKVDQLMKHIVEGQYFGQTISVIYTIEFQKRGLPHAHILLWLHQSNKYPTPQDIDRIITAELPSQEDDPMGFNAVTQFMLHGPCGSGNKNAPCMVDGFCSRNYPKKFSNETTIDKDGFPTYRRRDDGRYVKKGDINLDNQFVVPYNRDLLLKFQAHLNVEWCNKSRAIKYLFKYLHKGLDRATILIEENVSVSNTSNSTEIREVDEIKTYLDCRYVSACEACWRIFNFDIHYRSPSVMRLTFHLPGENSLILRDSQPLSSVIRRDGIEHTMFTEWMRMNSISPEARTLTYSEFPTKFVWDQRKKIWKQRQIGRTIGRIYYAHPTSGERYYLRILLNIVRGPQNYEQIRTVGGLIYTTFKEACYALGLLNDDKEWNVALNEAAHWASGSQLRELFVTILLFGEVTNVEQFWKNSWQLLSDDILYNKRRLFHHFSLELTVEQIKTYCLIEIEKLLIKNGKELSDFNGMPLPDKSAVEPMDNRLIREELNYNIQELENEHRRCYPLLNQEQSEIYNVVMHAVNTNTGGLYFVYGHGGTGKTFLYRTIIAKLRSEKKIVLAVASSGIASLLLPGGRTAHSRFQIPLDIFENSTCSIKQNTQLAQLMIQTDLIIWDEAPMTNKLAFEALHRSLQDIVGYKYPDKATDPFGGKTILLGGDFRQILPVITKGQRQDIVQACINNSYLWDHCKMFKLCKSMRVSDNTSSGELNSLAREFNTWLLQIGDGKIPTISREGEEVPSWTRIPSQYLLSPMGDSLKQIVESTYPNLQQHLWNEEYLRERAILTPLNDTADEINNYIIDMIEGSIKQYRSSDEIDKATDNIIEQELMYPVEFLNSLNFTGIPNHCLNLKEGMPIMLLRNINPALGMCNGTRLLIMHLGNWIIEAKIITGTNIGAKVLIPRIVLTASDSKWPFVLRRKQFPIKVCYAMTINKSQGQSLNYMGLYLPKPVFCHGQLYVALSRVTSPLGLRILIFEQDDRYIEYTKNVVYHEVFNGLL. 1851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00082 1850 Gene3D - 1360 1547 IPR027417 -
Seca7g00082 1850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1318 1548 IPR027417 -
Seca7g00082 1850 Gene3D - 194 337 IPR012340 -
Seca7g00082 1850 SUPERFAMILY Nucleic acid-binding proteins 8 115 IPR012340 -
Seca7g00082 1850 CDD SF1_C_RecD 1780 1822 - -
Seca7g00082 1850 MobiDBLite consensus disorder prediction 345 362 - -
Seca7g00082 1850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1502 1846 IPR027417 -
Seca7g00082 1850 Gene3D - 122 184 IPR012340 -
Seca7g00082 1850 PANTHER UNCHARACTERIZED 762 1828 - -
Seca7g00082 1850 Pfam PIF1-like helicase 1363 1732 IPR010285 GO:0000723|GO:0003678|GO:0006281
Seca7g00082 1850 Pfam Helitron helicase-like domain at N-terminus 716 899 IPR025476 -
Seca7g00082 1850 CDD RPA1_DBD_A_like 24 112 - -
Seca7g00082 1850 SUPERFAMILY Nucleic acid-binding proteins 223 308 IPR012340 -
Seca7g00082 1850 Gene3D - 7 114 IPR012340 -
Seca7g00082 1850 MobiDBLite consensus disorder prediction 331 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00082 Seca-Chr7 1201745 1211619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00082 50 156 Core DNA Replication Machinery Family AT5G08020 30.841 1.29e-06 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00082 - - tpra:123895819 2185.99