Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00069 ATGGAGGGTGAGAATCAGGTAAATGATGCAAAAAACAAGCAAGTATCTGATGAAGAAGCTTTCCTATATGCCATGGAATTAGCAGGGGCCTCTGCTGTCCCTATGGTTCTCAAGTCAGCTTTGGAGCTTGGAGTCATTGAAACTATAGCAAAGGCTGGCCCTGGAGCTTACCTTTCCCCTTCTCACATAGCTTCTCAGCTTCCATCAATAAAGAATCCAGAAGCACCTGCTATGTTGGATCGCTTGTTGCGCTTATTGGCTAGCTACAACATCCTCACATATTCCCTCATCACTCATACTCATGGAGATAGAGATGCTGAAAGACACTATGGTCTTAGCCCTTATGCCAAATACTTTGTCAACAACCAAGATGGTTTCTCCATGATTTCTTCCTTTCTCATGCAACATGACAAAGTCCTCAAAGACATGTGGTATCATTTGACAGATTCAGTTGAGGAGGGTGGTCTTCCATTTAACAATGCTTATGGGATGACTGCCTTTGAATTTCATGGGACAAATCCAAGGTTCAACAAGCTTTTCAACAAGGGGATGTCAGATTGCTCAAGCATCATAATGAATAAAGTTCTTGAGACCTATAAAGGCTTTGAGGGTCTTGGATCTGTGGTTGATGTTGGTGGTGGGACTGGAACTATCATTAACATGATTGTCTCTAAGTATCCCACCATAAAGGGCATTAATTTTGACTTGCCTCATGTCATTAAAGAAGCTCCATCTTATCCAGGTGTGGAGCATGTTGGTGGAGACATGTTTGTCAGTATTCCAAAAGGTGATGCCATTTTCATGAAGTGGATATGTCATGACTGGAATGATGAGGAATGCTTGAAATTTTTGAAGAATTGCTATGATTCCCTGCCTGAGACAGGGAAGGTGATTTTGGTTGAATGCATTATTCCAGTAGTCCCAGACTCTAAGCTGGCCTCAAGGTGTGTGTTTGAAATGGATGTTATTATGTTGTGTCATAGCTCAGGTGGAAGAGAGAGAACAGAGAAAGAGTATGAGGCATTGGCTAAGGGGGCTGGATTCCAAGGTTTCCAAGTAGCAGGCTGTGCTTTCAACATGTATGTCATGGAGTTTCTTAAGAAGCCTTAG 1110 0.4243 MEGENQVNDAKNKQVSDEEAFLYAMELAGASAVPMVLKSALELGVIETIAKAGPGAYLSPSHIASQLPSIKNPEAPAMLDRLLRLLASYNILTYSLITHTHGDRDAERHYGLSPYAKYFVNNQDGFSMISSFLMQHDKVLKDMWYHLTDSVEEGGLPFNNAYGMTAFEFHGTNPRFNKLFNKGMSDCSSIIMNKVLETYKGFEGLGSVVDVGGGTGTIINMIVSKYPTIKGINFDLPHVIKEAPSYPGVEHVGGDMFVSIPKGDAIFMKWICHDWNDEECLKFLKNCYDSLPETGKVILVECIIPVVPDSKLASRCVFEMDVIMLCHSSGGRERTEKEYEALAKGAGFQGFQVAGCAFNMYVMEFLKKP. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00069 369 PANTHER O-METHYLTRANSFERASE 24 351 IPR016461 GO:0008168
Seca7g00069 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 367 IPR016461 GO:0008168
Seca7g00069 369 Gene3D Vaccinia Virus protein VP39 120 367 IPR029063 -
Seca7g00069 369 FunFam Caffeic acid O-methyltransferase 120 367 - -
Seca7g00069 369 Pfam O-methyltransferase domain 144 349 IPR001077 GO:0008171
Seca7g00069 369 FunFam Caffeic acid 3-O-methyltransferase 2 119 - -
Seca7g00069 369 CDD AdoMet_MTases 208 300 - -
Seca7g00069 369 PIRSF O-mtase 1 367 IPR016461 GO:0008168
Seca7g00069 369 Gene3D - 3 119 IPR036388 -
Seca7g00069 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 364 IPR029063 -
Seca7g00069 369 SUPERFAMILY "Winged helix" DNA-binding domain 16 122 IPR036390 -
Seca7g00069 369 Pfam Dimerisation domain 35 87 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00069 Seca-Chr7 1096869 1099175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00069 14 368 Monolignol Biosynthesis Gene Families AT5G54160 63.944 2.40e-169 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00069 K13066 - gmx:100780100 528.094