Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00053 ATGGCTACACAAGCTCTAGTATCTTCATCATCTCTTACCTTCTCAGCTGAGGCTGCCAAACAGAGCCTTGGAGCAAGATCACTCCAATCTCCAATTGGGTTCTCCAAAAAATGTTCCTTTATTGTCAAGGCAGCTTCTACTCCTCCTGTCAAGCAAGGAGCAAATAGACCCTTGTGGTTTGCATCAAAGCAGAGTCTTGCTTACTTGGATGGCAGCCTCCCCGGTGACTATGGATTTGACCCTCTTGGACTTTCAGATCCTGAAGGAACAGGAGGGTTCATTGAGCCAAAATGGCTAGCATATGGTGAGATCATCAATGGTCGTTTTGCAATGTTGGGTGCAGCTGGTGCTATTGCACCTGAAATTCTTGGCAAGGCTGGTCTGATTCCAGAGGAAACAGCACTCCCATGGTTCAAAACCGGTGTGATTCCACCTGCAGGAACATACAGCTACTGGGCAGACCCTTACACACTGTTTGTGTTGGAGATGGCACTGATGGGATTTGCAGAGCACAGGAGATTCCAAGATTGGGCCAAACCAGGGTCTATGGGGAAGCAATACTTCTTAGGACTAGAGAAAGGTCTTGGAGGTTCAGGTGACCCAGCTTACCCTGGTGGACCTTTCTTTAACCCTCTTGGTTTTGGTAAGGATGAGAAATCCATGAAGGATTTAAAGCTGAAGGAAGTGAAGAATGGAAGGTTGGCCATGTTGGCAATATTGGGTTACTTTATTCAAGGTCTTGTCACGGGTGTTGGGCCATACCAAAACCTCCTAGATCATCTTGCTGACCCTGTGAACAACAATGTCTTGACCAGTCTCAAGTTTCACTGA 831 0.4693 MATQALVSSSSLTFSAEAAKQSLGARSLQSPIGFSKKCSFIVKAASTPPVKQGANRPLWFASKQSLAYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPWFKTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH. 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00053 276 Pfam Chlorophyll A-B binding protein 67 245 IPR022796 -
Seca7g00053 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Seca7g00053 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 271 IPR001344 GO:0009765|GO:0016020
Seca7g00053 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
Seca7g00053 276 FunFam Chlorophyll a-b binding protein, chloroplastic 57 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00053 Seca-Chr7 966692 969503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00053 19 276 Chloroplast and Mitochondria Gene Families AT1G61520 88.372 1.13e-168 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00053 K08909 - gmx:100808379 516.538