Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00052 ATGTTTGGGTTTATGCTCACTGGAAAATGGATACAGAGATCAAAAGGCTTGGAAAGATACCCGTGGCGCAAATCTTCTGATTTTATACCTAGAATGGGAGTTGGCCGTGAAGTCTCAATCTCCCTCGATGGAGTGAGGGACAAGAACATTATGCAGCTCAAGAAGCTCAATATTGCTCTTTTCCCTGTTCGATACAATGACAAATACTATGCTGATGCTCTTGCTTCCGGGGAATTCACTAAACTAGCTTACTACAGTGATATTTGTGTCGGTGCAATTGCATGCCGGCTTGAGAAGAAGGAAGGTGGGGGGCAAGTTCGGGTTTATATCATGACTTTAGGTGTCTTAGCACCTTACCGTGGTCTTGGTATTGGAACAAAGCTATTGAATCATGTTCTTGATCTTTGCTCCAAGCAAAACATTTCTGAGGTTTACTTGCATGTGCAGACGAACAATGAAGACGCCATAAACTTTTATAAGAAATTTGGGTTTGAAATCACAGAAACAATCCATAACTATTATACTAATATCACACCACCAGACTGCTATGTTCTCACGAGGCATACAACTCCAAGCCCCACGAAGAAATAA 591 0.4162 MFGFMLTGKWIQRSKGLERYPWRKSSDFIPRMGVGREVSISLDGVRDKNIMQLKKLNIALFPVRYNDKYYADALASGEFTKLAYYSDICVGAIACRLEKKEGGGQVRVYIMTLGVLAPYRGLGIGTKLLNHVLDLCSKQNISEVYLHVQTNNEDAINFYKKFGFEITETIHNYYTNITPPDCYVLTRHTTPSPTKK. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00052 196 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 40 191 IPR000182 GO:0016747
Seca7g00052 196 PANTHER N-ALPHA-ACETYLTRANSFERASE 36 191 - -
Seca7g00052 196 CDD NAT_SF 82 147 - -
Seca7g00052 196 Gene3D - 36 189 - -
Seca7g00052 196 FunFam Putative n-alpha-acetyltransferase 50 37 190 - -
Seca7g00052 196 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 47 186 IPR016181 -
Seca7g00052 196 Pfam Acetyltransferase (GNAT) family 79 164 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00052 Seca-Chr7 962627 966651 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca7g00052 Acetyltransf_1 1.2e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00052 K20793 - gmx:100499961 319.316