Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00030 ATGGTGAGATCAACACAGTATGAGAGATTTTCAAAGGATTTTGTAATGGGAGGAGCAGCAGCAATCGTATCAAAGAGTGCAGTGGCACCGATTGAGAGAGTGAAGCTTTTATTGCAAAACCAAAGTGAAATGATTAAAAGAGGACAGCTCAAAAAACCATACCTGGGTGTGTCTAATGGCTTTAAAAGGGTCTACGTGGAAGAGGGTCTGATTGCCTTTTGGAGAGGTAATCAGGCCAATGTTATAAGATATTTCCCCACCCAGGTAGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATCTTTGGGTATTCCAAAGAGAGAGACGGGTACATTAAGTGGTTTGCTGGGAATGTGGCTTCAGGCAGTGCTGCTGGGGCGACTACTTCACTGCTTTTGTATCATTTAGACTATGCACGGACACGTTTGGCCACTGATGCATTGGAGTGTCGTGCTACCGGTCAGCGCCAGTTTAAAGGACTGATTGATGTTTACCGTAAAACCTTATCAAGTGATGGATTTGCCGGCTTGTACAGGGGATTTGGGGTTTCAATATTGGGAATCACCATGTATCGAGGGATGTACTTTGGGATCTATGACACCATGAAGCCTATTGTTTTAGTTGGGTCTTTTGAGGGGAACTTTTTTGCTAGTTTCTTATTAGGTTGGAGCATCACAACTTTCTCAGGTGTTTGTGCATACCCGTTTGACACATTGCGGCGGCGAATGATGCTAACCTCTGGACATGAGAACAAGTATTGTAATGCTATACATGCATTTCGTGAGATTGTTCGACAAGAGGGTTTCTTCGCCTTATTTCGAGGAGTTACTGCAAATATGCTTCTTGGTATGGCAGGAGCTGGGGTGCTCGCTGGATATGATCAGCTCAACCGTATTTCATCTAGACACACTCACTAG 921 0.4376 MVRSTQYERFSKDFVMGGAAAIVSKSAVAPIERVKLLLQNQSEMIKRGQLKKPYLGVSNGFKRVYVEEGLIAFWRGNQANVIRYFPTQVAFNFAFKGYFKSIFGYSKERDGYIKWFAGNVASGSAAGATTSLLLYHLDYARTRLATDALECRATGQRQFKGLIDVYRKTLSSDGFAGLYRGFGVSILGITMYRGMYFGIYDTMKPIVLVGSFEGNFFASFLLGWSITTFSGVCAYPFDTLRRRMMLTSGHENKYCNAIHAFREIVRQEGFFALFRGVTANMLLGMAGAGVLAGYDQLNRISSRHTH. 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00030 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 114 206 IPR018108 -
Seca7g00030 306 Pfam Mitochondrial carrier protein 115 206 IPR018108 -
Seca7g00030 306 Pfam Mitochondrial carrier protein 215 300 IPR018108 -
Seca7g00030 306 Pfam Mitochondrial carrier protein 9 104 IPR018108 -
Seca7g00030 306 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Seca7g00030 306 PRINTS Mitochondrial carrier protein signature 129 147 IPR002067 GO:0055085
Seca7g00030 306 PRINTS Mitochondrial carrier protein signature 223 245 IPR002067 GO:0055085
Seca7g00030 306 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Seca7g00030 306 PRINTS Mitochondrial carrier protein signature 179 197 IPR002067 GO:0055085
Seca7g00030 306 PRINTS Mitochondrial carrier protein signature 76 96 IPR002067 GO:0055085
Seca7g00030 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 300 IPR018108 -
Seca7g00030 306 PRINTS Adenine nucleotide translocator signature 10 22 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca7g00030 306 PRINTS Adenine nucleotide translocator signature 219 235 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca7g00030 306 PRINTS Adenine nucleotide translocator signature 54 75 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca7g00030 306 PRINTS Adenine nucleotide translocator signature 114 127 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca7g00030 306 PRINTS Adenine nucleotide translocator signature 88 100 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca7g00030 306 SUPERFAMILY Mitochondrial carrier 8 297 IPR023395 -
Seca7g00030 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 102 IPR018108 -
Seca7g00030 306 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 7 303 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca7g00030 306 Gene3D Mitochondrial carrier domain 11 305 IPR023395 -
Seca7g00030 306 FunFam ADP,ATP carrier protein ER-ANT1 11 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00030 Seca-Chr7 810290 813508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00030 8 304 Antiporters AT5G17400 79.125 1.96e-168 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00030 K05863 - gmx:100798418 538.88