Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00017 ATGTCAACTGCAATTCTGACTCTATCTGAGAATGGTGATCTTGGGAGGATCCGTGAAAAGTGGCTTTCAGAAAAGGCTTGTGGTTTTCATAGTACTGGGGATGAGCAGCTTCAAATAAATAGCTACATGGGCTTGTTTCTAATCTGTGGGACTGCATGTTTCCTGGCGCTTCTTATCTACTTCTTGCTACGTCGATTCAGTCAAAACTCCCCTCACAAAGCTGATCCTTCTAATCCTAGCAGATCACACTCTGCACGCATCCAAACTTTTCTAAATTTGGTTGATGAAAAAGAAGACATATCACACAAGAACTTGAAAAGAAAAGTTGAGGATATTTCATCACATGCTTATTCCAGAGAAAATCATTTGAGGAGTATATCCAAGAGAGTACAAATGGGCATTTCCCAAGAGGCTACTTATGGTTAA 426 0.4014 MSTAILTLSENGDLGRIREKWLSEKACGFHSTGDEQLQINSYMGLFLICGTACFLALLIYFLLRRFSQNSPHKADPSNPSRSHSARIQTFLNLVDEKEDISHKNLKRKVEDISSHAYSRENHLRSISKRVQMGISQEATYG. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00017 141 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 83 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00017 Seca-Chr7 638392 638817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00017 1 121 Ion Channels AT3G51480 46.094 2.12e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00017 K05387 - cit:102630882 138.272