Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05274 ATGGCGTTGTGCCTTTCGTCATCTTCTGCTACATCTCCATGCATTCCAACGCTAGATAACACGCTTCACAGTGAAGCTACACACCACTGTCTTTTTCACTTCTCTAATCCAAATTCCAAAGCCAAATCAATTTCTCCTCTGATTTTGTTTGTTTGTGAAGGACGGTCAAATATATACTCTCCTGCTTTACAAATGAACCCGTTTTCCGTCGTTGATCAAAGATCCATGGCTAACATTTTGATATTCATATTCTTCTCCATCATCGTCTCCATATCACCCTCTTATGGATACGATCCGTTGGATCCTTTGGGCAACATCACCATCAAATGGGATTTCTTGTCTGATAATGGAGACACAGTCGATGTGAAGGTTTCAATATACAACTTGCAACTATTTCGCCATGTGGAAGAGCCTGGTTGGAAATTGGGTTGGGCTTGGAGGGGTGATGAGGTGATTTGGGCAATGTTGGGAGCAGAGGCTACAGAGCAAGGGAATTGCACAAGATTCAGGGGACAGAATAAACCCCATTGTTGTGAGAAGGAGCCAGTTATTATTGATCTCATGCCTGGAACCCCATACAACCTGCAGACTGCCAATTGCTGTAAAGGAGGGGTCCTCACATCCATCACTCAAGATCTTACCAAATATGGTGCCACCTTCCAGATGAATTATGCCAAATCATCACAATACTTTCCAGGTGCCTCCAATTTTAGCATGCCTGAAAATTTCACCCTTGGAATTCCTGGTTATAGCTGTGGCACATCATTTCAAGTCCCACCAACCAAGTTCACCAAAGATGGACACCGATGGCAGCAAGTCTTAGAGACGTGGAATGTGACATGTATTTACTCCCAGTTTCTAGCATCACCAGCCCCAAAATGCTGTGTCTCCTTGTCTTCATTCTATAATAGTACCATTGTTCCTTGCCCCATATGCAGCTGTAATTGCCAAGGTCTACCAGGAGCAAATTGCTATTTGAAAAAATTCAGTTCTGATAAGAGTTCAGTGTTGCAACTGCCACAAGCGCATGAGACAGAGACAGTGGTGAGGTGTACACATCACATGTGCCCCATTCGTGTTCACTGGCATGTGAAACAAAGTTATAAAGAGTATTGGAGGGTCAAGATCACAATCACAAATCTGAACTTGGTCAAAAACTACTCCCAGTGGAATTTGGTGGTTTTACACCCTAACTTGCGAAGTATAACCCGAGTTTTCAGTTTCAACTACCAGCCACTGAAAATTTATGGAAATCTCAATGATACAGGGATGTTTTGGGGGCTAGAGTACTACAATGACTTGTTGCTGGCACATGGGGACAATGGGAATGTACAAACAGAAGTGTTACTGCACAAAGATCGAGGAGAATTCACCTTCAAAGAAGGATGGACTTTTCCAAGAAAAATTTCATTTAATGGTGATGAGTGTGTCATGCCATCTCCTGACGCGTACCCTAGGCTCCCCAACACAGCCATGGCCACAACTACCACAACCTCCATCATTATTTTCTTCTCAATGTCACTGCCTCTGCTCTCAATATTGATCTAG 1548 0.4335 MALCLSSSSATSPCIPTLDNTLHSEATHHCLFHFSNPNSKAKSISPLILFVCEGRSNIYSPALQMNPFSVVDQRSMANILIFIFFSIIVSISPSYGYDPLDPLGNITIKWDFLSDNGDTVDVKVSIYNLQLFRHVEEPGWKLGWAWRGDEVIWAMLGAEATEQGNCTRFRGQNKPHCCEKEPVIIDLMPGTPYNLQTANCCKGGVLTSITQDLTKYGATFQMNYAKSSQYFPGASNFSMPENFTLGIPGYSCGTSFQVPPTKFTKDGHRWQQVLETWNVTCIYSQFLASPAPKCCVSLSSFYNSTIVPCPICSCNCQGLPGANCYLKKFSSDKSSVLQLPQAHETETVVRCTHHMCPIRVHWHVKQSYKEYWRVKITITNLNLVKNYSQWNLVVLHPNLRSITRVFSFNYQPLKIYGNLNDTGMFWGLEYYNDLLLAHGDNGNVQTEVLLHKDRGEFTFKEGWTFPRKISFNGDECVMPSPDAYPRLPNTAMATTTTTSIIIFFSMSLPLLSILI. 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05274 515 PIRSF COBRA 68 515 IPR006918 GO:0010215|GO:0016020
Seca6g05274 515 PANTHER PROTEIN COBRA 84 505 IPR006918 GO:0010215|GO:0016020
Seca6g05274 515 Pfam COBRA-like protein 122 284 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05274 Seca-Chr6 119659669 119662696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05274 75 488 COBRA Gene Family AT1G09790 54.869 3.88e-165 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05274 - - lang:109329241 711.449