Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05273 ATGGCAAATTCAAAGGGTTCATCAGGCATCAGAAACTTGATGTATTCCGGAAAGCACGCTCTGCTTCCTCCTAAAATCCCATTTCCTATTGTTTCCCAAGCATATGCTGAGTACATGCCAAAACCTACAATTGGTTCAAAGGTTGTGCAGAAACCCAGAGAGGGCAACCCACACCATCAACGAACTTCATCTGAGAGCCTTGTTATAGAGGATCAGCCTTCATGGCTTGATGATCTCCTTAGTGAGCCAGAGACACCTATCCGAAGGGGTGGACATCGGCGTTCATCAAGTGATTCTTTTGCATATGTAGATGCAACTAATGTTTCTAACATCGGTTATGCAGATCAGGATCAATGTAAATTTAGGAATTTGGCATCTATTCCATCTTGGTCATCTCAAGACTTTGATCACAGCAAAGATGCTCACCATATACCCTTCTATACAGAAACAAACTCAACAAAACTGAATAATAGGGCATGGGACTCTTATCTAAATCCTGTGACCCATCCAGGTGGTTGTCTCTCTGGCAAAGACAATGTTGCTTTTCAGAGATCAGGATTGTCATGTCCACCGCATGAAGCAGAAGGGGTTCCATCCACTGCAAATGAAAAGCATGATTCAGTAGAATCTGGTGCACAGGATGCAAAATCATCTTCCGACAGAAAGGATGGTTCAAATGCTTCAAATGCTAAGTCATCTGCTTCTGAAACAGATACAAAACGTGCTAAACAGCAATTTGCTCAACGTTCAAGGGTCCGTAAACTTCAATACATAGCTGAACTGGAAAGAAATGTACAAGGTTTACAGGCAGAAGGATCTGAAGTATCAGCTGAGCTTGAATTTCTTAACCAGCAGAATCTAATCCTTAGTATGGAGAATAAAGCACTCAAGCAACGCTTAGAAAGTTTAGCACAAGAACAGCTTATCAAATATTTGGAGCAGGAAGTATTGGAAAGAGAGATCGGAAGATTACGTGCATTGTATCAGCAGCAACAGCAGCCATCACAGCAACCATCAGGTAGCCATCGGCGTGCAAATAGCAGAGACCTTGAAACCCAGTTTGCAAACCTTTCTATAAAACACAAAGACACCAATTCAGGGCGTGATCCAGTGACAGGGGCACTTCGAATTTAG 1134 0.425 MANSKGSSGIRNLMYSGKHALLPPKIPFPIVSQAYAEYMPKPTIGSKVVQKPREGNPHHQRTSSESLVIEDQPSWLDDLLSEPETPIRRGGHRRSSSDSFAYVDATNVSNIGYADQDQCKFRNLASIPSWSSQDFDHSKDAHHIPFYTETNSTKLNNRAWDSYLNPVTHPGGCLSGKDNVAFQRSGLSCPPHEAEGVPSTANEKHDSVESGAQDAKSSSDRKDGSNASNAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQGLQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRALYQQQQQPSQQPSGSHRRANSRDLETQFANLSIKHKDTNSGRDPVTGALRI. 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05273 377 Coils Coil 251 306 - -
Seca6g05273 377 Gene3D - 240 292 - -
Seca6g05273 377 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 359 IPR044797 -
Seca6g05273 377 MobiDBLite consensus disorder prediction 47 67 - -
Seca6g05273 377 MobiDBLite consensus disorder prediction 184 247 - -
Seca6g05273 377 SMART brlzneu 236 295 IPR004827 GO:0003700|GO:0006355
Seca6g05273 377 MobiDBLite consensus disorder prediction 328 347 - -
Seca6g05273 377 CDD bZIP_plant_RF2 238 286 IPR044759 GO:0003700|GO:0006355
Seca6g05273 377 MobiDBLite consensus disorder prediction 356 377 - -
Seca6g05273 377 MobiDBLite consensus disorder prediction 328 343 - -
Seca6g05273 377 MobiDBLite consensus disorder prediction 198 221 - -
Seca6g05273 377 SUPERFAMILY Leucine zipper domain 247 289 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05273 Seca-Chr6 119654883 119658832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05273 73 310 bZIP Transcription Factor Family AT2G42380 32.932 2.11e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05273 - - gmx:100813098 561.992