Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05205 ATGGGCAAGGGAGAGGGAGGAGAAGAACAACACACAAACACAAAGTTGGAAATTGGTCTCTCTTTGCACATAGCTGCACCCAAGCAACAAGAACAGAATGGTGAAATAGAAGATGATGCAGGAAACAACAATTCTAGACAGTTGAATGTTATACAAATGGAGATGGATCGAGTAAAAGAGGAAAACAAAACTCTGAGGAAAGCGATGGAGCAAACAATGAAAGACTATCATGATCTGCAAATGAAAATTGAAGCCATGCAAGAGAACAATAAATTTAAAACGGATCATCAAATTTCTCTCCCACTTCAAGACGCTAACAATGAATTGGAAGAAGGAGCGCCTACCATTAATCCCGATGAGATCTTCGATACGAACAAAATGCCATTCCCTAGAAAAATGAATGATCACATTATTAGCGAGAGTGAATTGAATTTATCACTAAGGTTGCAGACAAGTCATCAGCAAGAAAGAAATGTAGATGATAAAGAAGAGGAACCTTCAAATTTTGCATCAATAGAGTGTACTGGGCAGAGTCACCATGATATTACTATGCATGCTACACAGTACTCCCCTCCAAATAGAAAGCCTAGGGTTTCAGTTAGAGTAAGATGTGAGGAAGCCAAAATAAATGATGGGTGTCAATGGAGAAAATATGGCCAAAAAATTGCAAAAGGAAATCCTTGTCCACGTGCCTACTATCGTTGCACTGTAGCCCCAGGCTGCCCTGTTAGGAAACAGGTGCAAAGATGCTTAGATGACAAGTCCATACTAATCACGACATATGAAGGAACACATAACCATCCACTCCCTGTGGGTGCAACTGCTATGGCTCCTGCAGCGGCTTCTTTTATGAAGATAGACTCAAACTATTCTATGTCAGGTGGCACATACAGTCTCAACCAACCATCACCATCACTTTCTTACAAATACAAAAGCTTCCACCCTTTAAATCCATCTTCCAATATTAGAAGCATAAACCACCTTAATGACCCCTCCAAAGGGATAGTCCTTGATCTCACTAATGATTATTATAATCTCAATGACCCGCTCCGTTCTTATAATAATCAAAGTAGTAAGAATTTTCCTTGGAGGATGCAAAACGAACAACAATATAGTGGTAATGCTATTGAAATGAACAAATTTATTAGATCTGCAGGAAATGAGAGGGATGATAATAAGTTGAGGGTTTCAGTTGCAGCGGCTATAACATCATTTCTCAATAAAGAAAGCACCAACAACCATTGGATTGTAGAATCTCTCTCAAGAAATGGTAAACTTACTGATATTTGA 1290 0.3899 MGKGEGGEEQHTNTKLEIGLSLHIAAPKQQEQNGEIEDDAGNNNSRQLNVIQMEMDRVKEENKTLRKAMEQTMKDYHDLQMKIEAMQENNKFKTDHQISLPLQDANNELEEGAPTINPDEIFDTNKMPFPRKMNDHIISESELNLSLRLQTSHQQERNVDDKEEEPSNFASIECTGQSHHDITMHATQYSPPNRKPRVSVRVRCEEAKINDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLDDKSILITTYEGTHNHPLPVGATAMAPAAASFMKIDSNYSMSGGTYSLNQPSPSLSYKYKSFHPLNPSSNIRSINHLNDPSKGIVLDLTNDYYNLNDPLRSYNNQSSKNFPWRMQNEQQYSGNAIEMNKFIRSAGNERDDNKLRVSVAAAITSFLNKESTNNHWIVESLSRNGKLTDI. 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05205 429 FunFam probable WRKY transcription factor 31 194 271 - -
Seca6g05205 429 Gene3D WRKY domain 194 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca6g05205 429 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 32 409 IPR044810 GO:0003700
Seca6g05205 429 Pfam WRKY DNA -binding domain 210 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca6g05205 429 Coils Coil 48 89 - -
Seca6g05205 429 SUPERFAMILY WRKY DNA-binding domain 202 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca6g05205 429 ProSiteProfiles WRKY domain profile. 204 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca6g05205 429 SMART WRKY_cls 209 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05205 Seca-Chr6 119077498 119079908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05205 51 334 WRKY Transcription Factor Family AT1G68150 45.675 3.14e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca6g05205 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05205 - - lang:109350732 392.504