Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05195 ATGAGTGTGAAGATAAAATTTGAGATCCTAAGCAGAAAATGCATCAAACCGTCCACACCCACACCACCGCAACTTAAAACCTTCCAACTCTCTCTGCTTGACCAGCTTTCCCCTAATATCCATGGCAACACCACCCTCTTCTACCCTCCCACTCCTACTCCCACCAACTTCTCCACCAAATCCCAACTTCTTCAAAACTCCCTCTCTCAAATGCTATCCCTTTTCTACCCTCTCGCCGGACGCTTCCAAGACGACGCTGCCACCATTGACTGCAGCGACCAAGGCGTCTTCTTCATCGAAGCTCGAACAAACACCACTTTCTCTGACATCCTCACCTACCCCGATATCAACACCCTCGAATGCCTCATCCCTACCACCGACAACGAAACCATGGCAATGTCAAACGGTTCCATGCTCCTTGTCCGCTTCACCTTGTTCGGTTGCGGCGGCACCGCCTTAAGCATCTCCCTCACCCACAAGATCGCCGATTTTGCAACCTTGATCACACTCCTCAACACCTGGACCGCCGCGTGCGGCGGAAACACCCAACCAGTGGTCCCAGAACTGGCCGCCGGCGCTGCTCTGTTTCCTCCAAGAGAGATTCCCGGCATGTCAGCTTCCGTAAACACTGCCGCCGAGAAGTTCACGGCGAGAAGGTTCGTTTTCGGCGCGTCCAAGGTTGAAGAGCTCAAGAACAGAGTCAAAAGCGCACTCCAAGAGAGTGATGGCATGATGTTTGAACCGTCGAGGGTGGAGGTGGTGGTAGCACTCATTTGGAGATGTGCTTTGTTAGCGAAAACGGCGTCGTTTAAGCCTTCAGTTTTGTTCCAAGCGGTGAACCTACGTCCGCGGATGGAGCCGGCGGTTCCTGAGACGGCGGTTGGGAACTTTGTGTGGCCATTCGCGGTGACGGTGGAGGAAGAGAGCCACGTGGAGTTGCATGAGTTGGTGAGGAGGATGAGGAAGTCTATGAGAGAGTTTGTTGAGAACAAGGTGGAGAAGTTCAAAGAGGGAGGTGCATTTGGTGTGGTGATGGAGAGTCTCAATGAGAGGGCTCAACTTTTGAAGAAGAAGGACAATATTGTGGTTTATAAGTGTTCGAGTTGGTGTAAGTATCGAGTGCTTGATGTGAATTTTGGATGGGGGAAGGCTGTGTGGATGTGCAGTGTGAATAAGCTGGTCAGTAATACAATTTCCTTGATGGATACGAGGGATAATGGTGGAGTTGAAGCTTCTCTCACTCTCAATGAGGAAGAGATGGCCTTACTTGAAAAACATCACGAGCTGCTACACTATGCTCTGATTAATCCTAGTATTATATGA 1323 0.5064 MSVKIKFEILSRKCIKPSTPTPPQLKTFQLSLLDQLSPNIHGNTTLFYPPTPTPTNFSTKSQLLQNSLSQMLSLFYPLAGRFQDDAATIDCSDQGVFFIEARTNTTFSDILTYPDINTLECLIPTTDNETMAMSNGSMLLVRFTLFGCGGTALSISLTHKIADFATLITLLNTWTAACGGNTQPVVPELAAGAALFPPREIPGMSASVNTAAEKFTARRFVFGASKVEELKNRVKSALQESDGMMFEPSRVEVVVALIWRCALLAKTASFKPSVLFQAVNLRPRMEPAVPETAVGNFVWPFAVTVEEESHVELHELVRRMRKSMREFVENKVEKFKEGGAFGVVMESLNERAQLLKKKDNIVVYKCSSWCKYRVLDVNFGWGKAVWMCSVNKLVSNTISLMDTRDNGGVEASLTLNEEEMALLEKHHELLHYALINPSII. 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05195 440 PANTHER F21J9.9 8 432 - -
Seca6g05195 440 Gene3D - 3 203 IPR023213 -
Seca6g05195 440 SUPERFAMILY CoA-dependent acyltransferases 271 334 - -
Seca6g05195 440 Pfam Transferase family 6 429 - -
Seca6g05195 440 Gene3D - 212 433 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05195 Seca-Chr6 119026833 119028673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05195 5 425 Monolignol Biosynthesis Gene Families AT5G48930 24.229 1.80e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05195 - - gmx:100808502 561.607