LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca6g05187	ATGGAGATCATGAAGAAGGGCGTGTGGAATGTACTCCATGGGTTGAAACCAGTGTTGTTGATGGTTGGAGTGCAGATTGCATATGCTGCTGTTAATGTCTTCTATAAGCTCGCCATCAACGATGGAATGAGTGTTAAAGTAGCCACTGCCTACCGTCTCGGTTTTGGATCTGCTTTCACTGTTCCTCTTGCTCTCATTTCTGAAAGGAACAACAGACCAAAACTCACTTGGAGGGTGCTCTTCATGGCATTTCTTTGCGGCTTGTTTGGGGGAAGTTTATTTCAAAACCTTTTCTACGAGGCACTGGCTTTAACATCAGCAACGTTTGTGTCCGCTATCTACAACCTCATTCCGGCCATCACCTTTATCTTGGCCATCTCCTGCGGATTGGAAAGATTAAATTTGAGGGCAGCAGCAGGAAAGGCCAAGGTGTTTGGAACTTTAATTGGAATCGGTGGGGCAATGTTGTTGACCTTTTTCAAAGGAGTAGAATTAGATATTTGGCCCTTCCACATCAACCTTTTGCATCCACATCACCAACACGTCGCACCACTCCATGCCCACTCTGCTGCTCAATTGTTGGGTGTTCTCTGTTCCATAGGAAGCTGCTTCTCTTTTGCTCTCTGGTTTATAATTCAGGCTAAGATGATCAAAGAATATCCAAGCCATTACTCAAGCACTGCTTTGATGTCTACAATGGGAGCAATACAAGCCACTGTTTTTGGTCTCTGTGTTGAGAGGGATTTGAGCCAATGGAAGCTGGGTTGGAATATAAGGTTACTAGCCGTGGCTTACTCGGTATATATCTTATTTAATTTACTCAATTATGTAAAAATTAGATATAATTAA	849	0.4311	MEIMKKGVWNVLHGLKPVLLMVGVQIAYAAVNVFYKLAINDGMSVKVATAYRLGFGSAFTVPLALISERNNRPKLTWRVLFMAFLCGLFGGSLFQNLFYEALALTSATFVSAIYNLIPAITFILAISCGLERLNLRAAAGKAKVFGTLIGIGGAMLLTFFKGVELDIWPFHINLLHPHHQHVAPLHAHSAAQLLGVLCSIGSCFSFALWFIIQAKMIKEYPSHYSSTALMSTMGAIQATVFGLCVERDLSQWKLGWNIRLLAVAYSVYILFNLLNYVKIRYN.	283

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca6g05187	282	PANTHER	WAT1-RELATED PROTEIN	16	273	IPR030184	GO:0016020\|GO:0022857
	Seca6g05187	282	Pfam	EamA-like transporter family	16	158	IPR000620	GO:0016020
	Seca6g05187	282	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	51	159	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca6g05187	Seca-Chr6	118965349	118967610	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca6g05187	15	266	Nodulin-like Gene Family	AT1G25270	41.270	1.31e-64	204

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca6g05187	-		-	gmx:100809587	431.024