Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05186 ATGGGAGATATATGGAAAGTGGTGCATGGGTTGAAGCCAGCCCTTCTGATGTTGGTGGTACAGATTGCATTTGCTTCGGTGAATGTGCTCTACAAAATTGCCATTAACGATGGAATGAGTGTGAGAGTAGTTACTGCGTACCGTCTCATTTTTGCAGCAGCTTGCACTATTCCACTTGCTCTTATTTTTGAAAGGAAGAACAGACCAAAGCTGACTTGGAGGGTCGTCTTCATGTCATTTTTCTGTGGACTATTTGGGGGAAGTTTATTCCAAAACCTTTATTTCGAGTCCTTGGCATTGATATCAGCCACATTTGCTTCCGCTGTTTATAATCTCATTCCTGCCGTCACTTTTATTTTGGCCGTCGCCTGTGGGTTCGAAAAATTAAATTTCCAATCAGCAGGAGGCAAGGCTAAGGTGTTAGGAACGATAACAGGGATTAGTGGGGCAATGATGCTCACCTTTCTCAAAGGTGTAGAAATTAACATTTGGACCTTCCACATTAACCTTTTGCATAAAAAGGCCAACTCGGGAACACTAAATAGTGACTCTGGCAGTAAATTGTTGGGAATTTTTTGTGGTCTTGGAAGCTGCTTCTGTTTTGCATTATGGCTCATCATTCAGGCTAAGATGAGCAAAGAATATCCAAACCATCATTCAAGTACAGCTTTGATGTCCTTCATGGGGGCAATACAAGCCACTGTTTTTGCCCTTTGTGTTGAGAAGGATTGGAGCCAATGGAGATTGGGTTGGAGTATTAGGCTTCTAACAGCAGCGTATTCGGGAATTGTGGCCTCTGGAATAATGGTTGTTGTGATTGCATGGTGTGTAAGGATGAGAGGTCCACTGTATGCCTCTGTTTTCAATCCTCTGATGCTTGTGCTTGTGGCTATTGCTGGTTCTTTGATGTTGGATGAGAACCTATACTTAGGAAGTGTAATTGGAGCAGTGCTAATTGTGATTGGATTGTACATGGTGCTGTGGGGTAAGAGCAAAGAAATGAAAAAGGTTACTCACTTAGAAATCACTCCTGAAATCGAAGAAATTGAGGTTGTTGTCACGTCTACGACAGAAGATCAAGATAAAGGTAACAGCAGCCACACCATTGTTGGCAAGGATGTTGATAATTCATCAAAAGGTGAACACCAAGAACAAGACACCAAAAACAACGGAAAAGAAGAAATTGCTTCAAATGAATTAGCCTCCCTCGACAGCCTAAAAAGTGCACAAAATTAA 1236 0.4191 MGDIWKVVHGLKPALLMLVVQIAFASVNVLYKIAINDGMSVRVVTAYRLIFAAACTIPLALIFERKNRPKLTWRVVFMSFFCGLFGGSLFQNLYFESLALISATFASAVYNLIPAVTFILAVACGFEKLNFQSAGGKAKVLGTITGISGAMMLTFLKGVEINIWTFHINLLHKKANSGTLNSDSGSKLLGIFCGLGSCFCFALWLIIQAKMSKEYPNHHSSTALMSFMGAIQATVFALCVEKDWSQWRLGWSIRLLTAAYSGIVASGIMVVVIAWCVRMRGPLYASVFNPLMLVLVAIAGSLMLDENLYLGSVIGAVLIVIGLYMVLWGKSKEMKKVTHLEITPEIEEIEVVVTSTTEDQDKGNSSHTIVGKDVDNSSKGEHQEQDTKNNGKEEIASNELASLDSLKSAQN. 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05186 411 MobiDBLite consensus disorder prediction 356 373 - -
Seca6g05186 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 332 - -
Seca6g05186 411 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016020|GO:0022857
Seca6g05186 411 MobiDBLite consensus disorder prediction 374 393 - -
Seca6g05186 411 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Seca6g05186 411 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020
Seca6g05186 411 MobiDBLite consensus disorder prediction 355 411 - -
Seca6g05186 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05186 Seca-Chr6 118951449 118953681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05186 11 351 Nodulin-like Gene Family AT1G25270 41.449 1.97e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05186 - - gmx:100798755 504.597