Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05185 ATGAAGGAGGAGAGATGCAATAACGTGGTGAAGCCAACGGTGCTGATGGTGGGTGTGCAGATAGCATTTGCTGGGATAAATGTCCTCTACAAGCTCACCGTGAACGATGGGATGAACTTGAGGGTCGTTATTGCATACCGCTTTCTATTCGCTACTGCTTTCATAGCTCCACTTGCTCTCATTCTTGAAAGGAACAAGACCACAAAGATGACTTGGACGGTACTCTTTCAGTCCTTTCTCTGCGGTTTGTTTGGAGGATCATTAGCTCAAAACTTCTACTTAGAGTCTCTCGCGTTTACTTCTGTAACCTTTGCATCCGCCATGTCCAACCTTACGCCAGCCATAACCTTTATCATGGCCGTTTCTTTCGGTTTGGAAAAAATAAATTTGAGAACGTCAGGAGGGAAGGCGAAGGTACTAGGTACATTAATTGGAATGGGAGGTGCAATGATTCTGACTTTAATTAAAGGTATGGAAATCAAGATAGGGTCCTTCCACTTAAACCTTTTGCATCATCAAAACGGTGTGCAATCATCTCATGCTAATGCTACCACTGGTGGTTCTAAGACTGTCTTGGGTGCTCTCTGTGCCTTGGCTGGTAGCGTCTCTTACGCATTGTGGCTCATTATTCAGGCAAAATTGACAAAGAGATACCCGAATCATTACTCAAGCACAGCGTTGATGTCTTTTTGGTCGACACTGCTATCCATTGCGTTTGCTATTTGCTTTGAAAGGGATTTGAGTCAGTGGAGGTTGGGTTGGAATATTAGGCTTCTAACTGTTTCTTATGCGATAGCATTTGCTGGGATGAATGTCCTCTACAAGCTCGCCGTGAACGATGGGATGAACTTGAGGGTCGTTATTGCATACCGCTTTCTATTCGCTACTGCTTTCATAGCTCCACTTGCTCTCATTCTTGAAAGGAACAAGACCACAAAGATAACTTGGACGGTACTCTTTCAGTCCTTTCTCTGCGGTTTGTTTGGAGGATCATTAGCTCAAAACTTCTACTTAGAGTCTCTGGCTTTTACTTCTTTAACGTTTGCATCCGCCATGTCCAACCTTATGCCAGCCATAACCTTTATCATGGCCGTTTCTTTCGGGTTTGGAAAAAATAAATTTGAGAAGGGCAGGAGGGAAGTGAAGGTACTAGGTACATTAATTGGAATTGGTGGGGCAATGATTCTGACTTTCATTAAAGGCATGGAAATCAAGATAGGGTCCTTCCACTTAAACCTTTTGCATCATCAAAACGGTGCGCACTCATCACATGCTAATAGTAAGCCTGTCTTGGGTGCTCTCTGTGCCTTGGGTGGTAGCGTCTCTTCCGCATTGTGGCTCATTATTCAGGCAAAAATGACAAAGAGATACCCGAATCATTACTCAGCCACCGCGTTGATGTCTTTTTGGTCGTCACTGCTATCCATTGTGTTTGCTCTTTGCTTTGAAAGGGATTTGAGTCAGTGGAGGTTGGGTTGGAATATCAGGCTTCTAACCGTTTCTTATGCGGGTATAGTGGTTTCTGGAGTAGTGGTGGTTGTAATGTCATGGTGTGTGCACATGAGAGGGCCATTGTTTGTCTCTATTTTTAACCCTCTAGTGCTTGTGATATTGGCCATGGTTGATTCTACGATGTTGAACCAGAAACTACATCTTGGAAGGTACGTATATCTGCTTGTTTAG 1683 0.4385 MKEERCNNVVKPTVLMVGVQIAFAGINVLYKLTVNDGMNLRVVIAYRFLFATAFIAPLALILERNKTTKMTWTVLFQSFLCGLFGGSLAQNFYLESLAFTSVTFASAMSNLTPAITFIMAVSFGLEKINLRTSGGKAKVLGTLIGMGGAMILTLIKGMEIKIGSFHLNLLHHQNGVQSSHANATTGGSKTVLGALCALAGSVSYALWLIIQAKLTKRYPNHYSSTALMSFWSTLLSIAFAICFERDLSQWRLGWNIRLLTVSYAIAFAGMNVLYKLAVNDGMNLRVVIAYRFLFATAFIAPLALILERNKTTKITWTVLFQSFLCGLFGGSLAQNFYLESLAFTSLTFASAMSNLMPAITFIMAVSFGFGKNKFEKGRREVKVLGTLIGIGGAMILTFIKGMEIKIGSFHLNLLHHQNGAHSSHANSKPVLGALCALGGSVSSALWLIIQAKMTKRYPNHYSATALMSFWSSLLSIVFALCFERDLSQWRLGWNIRLLTVSYAGIVVSGVVVVVMSWCVHMRGPLFVSIFNPLVLVILAMVDSTMLNQKLHLGRYVYLLV. 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05185 560 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 398 - -
Seca6g05185 560 Pfam EamA-like transporter family 258 397 IPR000620 GO:0016020
Seca6g05185 560 Pfam EamA-like transporter family 14 152 IPR000620 GO:0016020
Seca6g05185 560 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
Seca6g05185 560 PANTHER WAT1-RELATED PROTEIN 265 552 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05185 Seca-Chr6 118926890 118939017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05185 261 556 Nodulin-like Gene Family AT1G25270 42.475 3.76e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05185 - - tpra:123910665 413.69