Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05184 ATGAAGTATAGGTGCGATGTGGTGCAGGGGTTGAAGCCAGCGCTGTTAATGGTGATGGTGCAGATTGCATTTGCTGGCGTCAATGTCCTCTACAAGCTTGCCGTCAACGATGGCATGAGCCTCAGGATCGTTGTTGCCTATCGCTTTCTATTCGCAACCGCTTTCATAGCTCCACTTGCTCTCATTCTTGAAAGGAAGAAGAGGACAAAGATGACTTGGATGGTACTGTTTCAGTCATTTCTCTGCGGTTTATTTGGAGGATCATTAGCTCAAAACTTCTACTTAGAGGCCCTGGCTTTAACTTCTGCGACATTTGCATCAGCCATGGCCAATCTTATACCAGCCATAACCTTTATCATGGCCGTTTCCTTCGGTTTGGAAAAATTAAATTTGAGATCGGTAGCAGGGAAGGCGAAGATAGTGGGTACATTAACTGGAATTGGTGGGGCAATGATACTGACCTTCCTTAAAGGTAAGGAAATCAATATAAGGTCCCACTTAAACCTTCTGCATCATCCAAACGTACATGTTATCGTTGGTGGTAAGACCGTCTTGGGTGCTCTGTGCGCCTTGGCCAGTGGCATCTCTTACGCATGTTGGCTCATTATTCAGGCAAAGATGAGTGAAAGATACCCGAGTCATTATTCAAGCACCGCGTTGATGTCTTTTTGGGGGTCAGTGTTATCCATTGTGTTTGCTCTTTGCATTGAGAGGGATTGGAGTCAGTGGAGGTTGGGTTGGAATATTAGGCTTCTAACCGTTGCTTATTCGGGTATAGTGGTTTCGGGAATGATGGTGACTGTAATTTCATGGTGTGTACACATGAGAGGGCCACTGTTTGTCTCTGTTTTTAGCCCTCTAATGCTTGTGATGGTGGCCTTGGCTGGCTGTACCATGTTGAACGAGAAGTTGCACCTTGGAAGCATCATCGGAGCAGTGTTGATTGTGTGTGGCTTATATGTGGTTTTATGGGGTAAAAGCAAAGAGGTGAAGAAAGGTGTGCAGATAACATTTGCTGGGATGAATGTTCTCTACAAGCTCGCCGTGAACGATGGGATGAACTTGAGGGTCGTTATTGCATACCGCTTTCTATTCGCTACTGCTTTCATAGCTCCACTTGCTCTCATTCTTGAAAGCTTGGAAAAAATAAATTTGAGAAGGGCAGGAGGGAAGGCGAAGGTACTAGGTACATTAATTGGAATTGGTGGGGCAATGATTCTGACTTTCATTAAAGGCATGGAAATCAAGATAGGGTCCTTCCACTTAAACCTTTTGCATCATCAAAACGGACCGCATGCTAATGCTACCACCGGTGGTAGTAAGCCTGTCTTGGGTGCTCTCTGTGGCTTGGCTTGTAGCCTCTCTTACGCAAAAATGACAAAGAGATACCCGAATCATTACTCAAGCACAGCGTTGATGTCTTTTTGGTCGTCACTGCTATCCATTGCGTTTGCTATTTGCTTTGAAAGGGATTTGAGTCAGTGGAGGTTGGGTTGGAATATTAGGCTTCTAACTGTTTCTTATGCGGGTATAGTGATTTCTGGAGTAACGGTGGTTGTAATGTCATGGTGTGTGCACATGAGAGGCCCATTGTTTGTCTCTATTTTTAACCCTCTAGTGCTTGTGATATTGGCCATGGTTGATTCTACGATGTTGAACGAGAAGCTACACCTTGGAAGCATCATAGGAGCAGTGTTGATTGTAAGTGGGTTATACGCGGTTGTATGGGGTAAAAGCAAAGACGTGAAGGAGAAGAATCAATTGGTGTCATCACAAATCCCCAATGCATCCAAATCCAACACAGTCGAAATAGTCGTGAGTTCTGCAAGATAA 1833 0.4468 MKYRCDVVQGLKPALLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFLFATAFIAPLALILERKKRTKMTWMVLFQSFLCGLFGGSLAQNFYLEALALTSATFASAMANLIPAITFIMAVSFGLEKLNLRSVAGKAKIVGTLTGIGGAMILTFLKGKEINIRSHLNLLHHPNVHVIVGGKTVLGALCALASGISYACWLIIQAKMSERYPSHYSSTALMSFWGSVLSIVFALCIERDWSQWRLGWNIRLLTVAYSGIVVSGMMVTVISWCVHMRGPLFVSVFSPLMLVMVALAGCTMLNEKLHLGSIIGAVLIVCGLYVVLWGKSKEVKKGVQITFAGMNVLYKLAVNDGMNLRVVIAYRFLFATAFIAPLALILESLEKINLRRAGGKAKVLGTLIGIGGAMILTFIKGMEIKIGSFHLNLLHHQNGPHANATTGGSKPVLGALCGLACSLSYAKMTKRYPNHYSSTALMSFWSSLLSIAFAICFERDLSQWRLGWNIRLLTVSYAGIVISGVTVVVMSWCVHMRGPLFVSIFNPLVLVILAMVDSTMLNEKLHLGSIIGAVLIVSGLYAVVWGKSKDVKEKNQLVSSQIPNASKSNTVEIVVSSAR. 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05184 610 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Seca6g05184 610 Pfam EamA-like transporter family 450 575 IPR000620 GO:0016020
Seca6g05184 610 Pfam EamA-like transporter family 12 138 IPR000620 GO:0016020
Seca6g05184 610 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 328 - -
Seca6g05184 610 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 142 - -
Seca6g05184 610 PANTHER WAT1-RELATED PROTEIN 334 375 IPR030184 GO:0016020|GO:0022857
Seca6g05184 610 SUPERFAMILY Multidrug resistance efflux transporter EmrE 479 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05184 Seca-Chr6 118889853 118903443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05184 334 604 Nodulin-like Gene Family AT1G25270 33.923 8.55e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05184 - - gsj:114424758 546.584