Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05178 ATGGCAGAAATTCAACCAAGCCACCATGTTGCTGCTGCTGCAATGGCCCGTAGCGAATCCAATCTTTCCAAAGTCTACAGCATAGACGTGGAAGGAGAAGCTGGAGACCATCAAGAGGTTGGTGATTTTGACTACACACAGAGGGCTCAGTGGCTCAGAGCTGCTGTTTTGGGTGCCAATGATGGGCTGCTCTCCACTGCATCCCTCATGGTTGGTGTCGGTGCTGTGAGGAAGGATGTTAACACCATGATGCTTACTGGTGTTGCTGGTTTGGTAGGTGGAGCTTGCAGCATGGCCATTGGAGAGCTTGTTTCTGTTTATGCACAATATGATATTGAACTCTCTCAGATGAAAAGAGAAGGAAACGTTCAGAAGAACAAATTGCCTAACCCCTATTACGCTTCCTTTGCCTCCGCCGTTGCTTTTGCCGTTGGTGCGGTGGTGCCCCTACTTGGTGCGGCGTTTATCAATGATTATGAGGTGAGGTTGGGGGTGATGGTCGCTGTTGTCAGCCTCGCCTTGGTGGTGTTTGGATGGTTGGGTGCCTTTCTAGGGAAAGCGCCTTTGGTGAAGTCATCTTTGAGGGTCTTGATTGGGGGATGGTTCGCCATGGCGTTTACTTTTGGTTTAACAAAGCTTGTAGACCATGTTGGTGGACTTTGA 663 0.4962 MAEIQPSHHVAAAAMARSESNLSKVYSIDVEGEAGDHQEVGDFDYTQRAQWLRAAVLGANDGLLSTASLMVGVGAVRKDVNTMMLTGVAGLVGGACSMAIGELVSVYAQYDIELSQMKREGNVQKNKLPNPYYASFASAVAFAVGAVVPLLGAAFINDYEVRLGVMVAVVSLALVVFGWLGAFLGKAPLVKSSLRVLIGGWFAMAFTFGLTKLVDHVGGL. 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05178 220 Pfam VIT family 123 211 IPR008217 GO:0005384|GO:0030026
Seca6g05178 220 Pfam VIT family 52 121 IPR008217 GO:0005384|GO:0030026
Seca6g05178 220 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 36 216 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05178 Seca-Chr6 118836868 118841124 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05178 19 218 Nodulin-like Gene Family AT3G43660 65.842 5.18e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05178 K22736 - gmx:121175311 271.552