Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05176 ATGGAGAGCGCGATCCTTCCGCCGCTCCCTCTCTTTGCCCCGTTTCCTTGCATTGCATTGCATCTGGTGCTACTGTCCGAGTCTTTTGGCACTCTCTTTTCTTTTAGCTTCTTCGCCTCCCAGACTGCTCTGGTTTTGGCTTTAAGACGTGTTGAGGGTAACAAAATGGTTGGAGGCATTGATGTTTTAGCCGATGATATGAGTATCAATGGAGCAGTAGAACCATTGCCTGAGGATTTTGACACAACAGCAATAATCAAAGATCCTCTGCCTCCCATGGTTGAAGGCAATGGCATTGTCAAGGAGGAGACTCAGATCAGTAAGGAAAAAGAGAAGAGAGAAATAGTACTGGGAAGAAATATTCACACTATGTGTCTAGAAGTCACTGAGCCCGATGCAGATGATGAGGTTACTGGGGATCGTGAAGCTCATATGGCAAGCGTATTGGCCAAATACAAAAGATCTTTAACTGAAAGGACAAAGTATCATTTAGGCTACCCTTATAATTTGGATTTCGACTATGGTGCACTCTCTCAACTTCAACACTTTTCAATAAACAACCTGGGAGATCCATTTATTGAAAGCAATTATGGTGTACACTCCCGGCAGTTTGAAGTTGGTGTTTTGGATTGGTTTGCCAGATTGTGGGAACTAGATAAAAATGAGTATTGGGGCTACATAACAAACTGTGGTACAGAAGGAAATCTCCATGGCATCCTAGTTGGGAGAGAGGTGTTCCCAGATGGGATTTTGTATGCCTCGCGGGAGTCACATTATTCTATTTTTAAAGCTGCTCGTATGTACAGAATGGAATGTGTGAAAGTTGAGACTCTTTGTTCTGGGGAGATTGATTGTGATGATTTCAAGGCCAAGCTTCTTTGTCACCAGGACAAGCCAGCAATTATAAATGTGAACATAGGCAAGTTTTTCCATCATTCTTTCTCTTACCCCTATTGTCCCATGCCTACCCTCCTCTTCACCTTGTTGATTCTGGCTCATAGAACTGAAGCTGGATTTTCGCAAGATAGGTTCTATATCCATTGTGATGGGGCTTTGTTTGGTCTCATGATGCCTTTCGTGAAACGAGCTCCAAAAGTCACTTTTAAGAAGCCTATTGGCAGTGTCAGTGTTTCTGGCCACAAATTCGTGGGGTGTCCCATGCCTTGTGGTGTGCAGATAACAAGATTGGACCATATTAATGCTCTTTCCAGGAATGTGGAATACCTTGCTTCTAGGGATGCCACAATCATGGGTAGTCGGAATGGCCATGCTCCCATATTCCTTTGGTATACCTTGAACCGGAAAGGATACAGAGGTTTTCAGAAAGAAGTACAGAAATGCTTGAGGAATGCACACTACTTCAAAGACCGCCTTGTTGAGGCAGGGATTGGAGCAATGCTTAATGAGCTGAGCAGCACGGTTGTGTTTGAGCGGCCACATGATGAGGAATTTATACGCAAGTGGCAGTTGGCATGCAAGGGGAACATCGCACATGTGGTGGTGATGCCAAACGTCACTATTGAGAAGCTTGATGATTTTCTAAACGAGCTACTGCAGAAGCGTGCTGCCTGGTTTCAAGATGGGAAGTGTCAACCTTATTGTATAGCATCAGATGTAGGTGAAACAAATTGTCTCTGTGCTCTGCATAAGTAA 1653 0.4404 MESAILPPLPLFAPFPCIALHLVLLSESFGTLFSFSFFASQTALVLALRRVEGNKMVGGIDVLADDMSINGAVEPLPEDFDTTAIIKDPLPPMVEGNGIVKEETQISKEKEKREIVLGRNIHTMCLEVTEPDADDEVTGDREAHMASVLAKYKRSLTERTKYHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELDKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSIFKAARMYRMECVKVETLCSGEIDCDDFKAKLLCHQDKPAIINVNIGKFFHHSFSYPYCPMPTLLFTLLILAHRTEAGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLDHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYFKDRLVEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIEKLDDFLNELLQKRAAWFQDGKCQPYCIASDVGETNCLCALHK. 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05176 550 Pfam Pyridoxal-dependent decarboxylase conserved domain 250 471 IPR002129 GO:0016830|GO:0019752|GO:0030170
Seca6g05176 550 SUPERFAMILY PLP-dependent transferases 159 519 IPR015424 -
Seca6g05176 550 Gene3D Aspartate Aminotransferase, domain 1 433 521 IPR015422 GO:0003824
Seca6g05176 550 Gene3D - 178 432 IPR015421 GO:0003824
Seca6g05176 550 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 374 395 IPR021115 GO:0016831
Seca6g05176 550 PANTHER - 102 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05176 Seca-Chr6 118807192 118812310 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05176 K25193 - gmx:100785163 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05257 12 141394177 141397251 Seca6g05176 6 118807192 118812310 PCT