Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05174 ATGTCTTCCCTTGCTCATAAAACTAATTATGAAACTTCACCTAACCATGTTGAGATTCCTATCCATGCCAATGGTGTGGAGCCAAAACCAAGGCAAGAAGATGAAGAGGGCAACATTGACTACTCACAGAGGGCACAGTGGCTCCGAGCAGCTGTGTTGGGAGCCAATGATGGATTGGTCTCTGTTGCATCATTGATGATGGGTGTTGGAGCTGTTAAGGAAAACATCAATGCCATGCTTGTTGCTGGGTTGGCAGGGTTAATTGCTGGTGCTTGTAGCATGGCAATTGGAGAGTTTGTCTCTGTGTACACTCAGTATGATATAGAGAGAGCTCAAATTGAAGGAGCCAATAATATTGCTGCTGGAATAATGAGTGAAGAAGCTCAAAGGGTGAAGCAGAAGCTGCCAGATCCATTTCAGGCTGCTCTGTCATCAGCACTAGCATTTTCTGTGGGTGCCCTGTTGCCACTGCTAGCAGCTGCATTTACAAGGGACTATAAGATTAGGCTTGTTGTTGTTGCATCTGTTGCTAGCCTGGCATTGCTGGTATTTGGTGGGGTTGGAGCAATGCTTGGAAAAACTCCACTGGGGAAGTCCTGTCTCAGAGTCCTCATTGGTGGCTGGATCGCTATGGCCATAACATTTGGCATCACCAAGTCATTTGGCTCTGTTGGACTTTGA 681 0.4655 MSSLAHKTNYETSPNHVEIPIHANGVEPKPRQEDEEGNIDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVKENINAMLVAGLAGLIAGACSMAIGEFVSVYTQYDIERAQIEGANNIAAGIMSEEAQRVKQKLPDPFQAALSSALAFSVGALLPLLAAAFTRDYKIRLVVVASVASLALLVFGGVGAMLGKTPLGKSCLRVLIGGWIAMAITFGITKSFGSVGL. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05174 226 Pfam VIT family 48 114 IPR008217 GO:0005384|GO:0030026
Seca6g05174 226 Pfam VIT family 124 218 IPR008217 GO:0005384|GO:0030026
Seca6g05174 226 MobiDBLite consensus disorder prediction 16 38 - -
Seca6g05174 226 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 31 221 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05174 Seca-Chr6 118798733 118799413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05174 32 226 Nodulin-like Gene Family AT3G43660 61.026 7.34e-83 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05174 K22736 - gmx:100817158 296.589