Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05173 ATGTCTATTTATTTCATGATGGTGCCCTTTGTTTTGCCTCTCCTATTCTTCTCATTCTTAGTGGGGAATTCAAAGGGACTGCTCCAAGTGGGTTTCTACTCCAACACATGTCCTCAAGCAGAGTCCACTGTTCGTGCTGTTGTTAGAGATGCTGTTCTCTCTGACCCCAACATGGCTGCTGTCTTGCTCAGGCTTCAGTTTCATGACTGCTTTGTTGAGGGATGTGATGGTTCAATTCTGATAGACAATGGTCCACAATCAGAGAAACAAGCATTTGCACATCAAGGGGTTAGAGGGTTTGGAGTGATAGAAAGAGCCAAGGCACAATTGGAAGCATCTTGCCCAGGAGTGGTTTCTTGTGCTGACATAGTGACATTGGCAGCCAGAGATGCCATAGTCATGGCAAATGGACCAGGATACCAAGTTCCAACAGGGAGGAGAGATGGTTTGGTTTCTAATCTTTCACTTGCAGCTGATATGCCAGAAGTTGATGATTCAATTCAGGTACTCAAGGACAAGTTTCTGAAGAAGGGTCTCACAGAGAAAGACCTTGTTCTTCTCAGTGCTGCACATACAATTGGAACCACAGCATGCTTCTTCATGACCAAAAGACTGTACAATTTTTTCCCAAACGGTGTGGGATCAGACCCAGCTATTAGCCCAAACTTCCTACCAGAGCTGAAGGCAAGGTGTCCTAAGAATGGAGACGTTAATGCCCGTTTAGCCATTGATGAAGGGAGTGAGCAGAGATTTGACAAACACATTTTGAACAACATAAGGGAAGGTTTTGCTGTGCTACAATCTGATGCCAGGCTTAATGATGACATAATGACTAGGAATATCATTGACTCCTACCTTAGTCCCCTCAATCCATTATTTGGACCTTCTTTTGAAGCTGATTTTGTTGAGTCAATTGTGAAGATGGGCCAAATTGGAGTCAAGACTGGTTTCCTTGGAGAGATTAGGCGCGTCTGCTCAGCATTCAATTGA 990 0.4424 MSIYFMMVPFVLPLLFFSFLVGNSKGLLQVGFYSNTCPQAESTVRAVVRDAVLSDPNMAAVLLRLQFHDCFVEGCDGSILIDNGPQSEKQAFAHQGVRGFGVIERAKAQLEASCPGVVSCADIVTLAARDAIVMANGPGYQVPTGRRDGLVSNLSLAADMPEVDDSIQVLKDKFLKKGLTEKDLVLLSAAHTIGTTACFFMTKRLYNFFPNGVGSDPAISPNFLPELKARCPKNGDVNARLAIDEGSEQRFDKHILNNIREGFAVLQSDARLNDDIMTRNIIDSYLSPLNPLFGPSFEADFVESIVKMGQIGVKTGFLGEIRRVCSAFN. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05173 329 PANTHER PEROXIDASE 25-RELATED 16 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 FunFam Peroxidase 31 174 - -
Seca6g05173 329 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Seca6g05173 329 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 Gene3D Peroxidase, domain 2 161 308 - -
Seca6g05173 329 FunFam Peroxidase 161 308 - -
Seca6g05173 329 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 CDD secretory_peroxidase 28 328 IPR033905 GO:0004601|GO:0042744
Seca6g05173 329 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Seca6g05173 329 SUPERFAMILY Heme-dependent peroxidases 28 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 Gene3D - 31 329 - -
Seca6g05173 329 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g05173 329 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05173 Seca-Chr6 118788214 118791049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05173 6 329 Peroxidase AT1G77100 55.521 5.80e-117 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05173 K00430 - gmx:547549 542.347