Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05166 ATGGAGATGAGGATTAAACATAGCGATAAGAGTGAGTATGAGGAGGACAAAGCAAGACTCACCATTTTGGAACTATCCAACATGATGAGCGTCCCCATGTCCCTGATTGCAGTGATCAACTTGAAGGTCCCTGAGGCTATCTGGCAAGGTGGTTCCAACATTCCCCTCTCCGCCTCCCAGATTCTCCACCGCATTCGTCCCCACGGCGGTGGTGACGTTGACAACCTCCAACGCATCCTCCGCTTGCTCACCAGTTATGACATATTTGAGGAGCACCTCACTGACACTCCCCAAAGCGGCGATGGCGAAAGGAAATACTCCCTCACGTATATAGGCAAGACTCTGATTCCGGATAGCATAAATGGTCTATCCTACAGTGCTTACATGCTCCAACACCATCAGGAAGCGTTTATGAGAGCTTGGCCATTGGTGGGGGAGGCAGTAGAGGATCCAAAGATAGGGGCGTTCAAGAAGGCGAATGGAGGAGAGGATGTGTTTCAATACTACGCCGACAGGGAAGATGCAATCAATTTATTTCATAAGGCCTTTTATGGGATGTCTGTACCCTTCATGACCAAAATGTTGGAAAACTATGACGGCTTTCAAGGGGTCGAAACACTCGTCGACGTTGGTGGCAACTCCGGTGTGTGCCTCCGAATGATCATGTCCAAATACCCAACTCTCCGAAAGGCTATTAACTATGATCTGCCCCATATGGTCGACTCTGCACCGCATATTCCAGGTAGTGTAACACACATTGGTGGTGACGCGTTGGAATATGTTCCCTGTTGTGATGCTATTTTTATGAAGTGGATATTTTTAGACTGGTCCGACGAGGAATGCAAGCAAGTGATGCATAATTGTTACGAGGCTCTTCCGGCTAATGGGAAATTGATCATTTGCGAACCGGTACTGCCGGAGTTAACCGATAATAGTCAGAGAACAAGAACATTGTTAGGGGGTGACATATTCACAATGACAATGTACAGACCTAAGGGAAAGCACAGAACCGAAAAACAGTTCATAGAGATTGCCACTTTTGCTGGTTTCCCTCGCTTTCGTGCCCTATATATTGACTCATACTTTGTTGTGTTTGAGTTTCAGAAATGA 1110 0.4685 MEMRIKHSDKSEYEEDKARLTILELSNMMSVPMSLIAVINLKVPEAIWQGGSNIPLSASQILHRIRPHGGGDVDNLQRILRLLTSYDIFEEHLTDTPQSGDGERKYSLTYIGKTLIPDSINGLSYSAYMLQHHQEAFMRAWPLVGEAVEDPKIGAFKKANGGEDVFQYYADREDAINLFHKAFYGMSVPFMTKMLENYDGFQGVETLVDVGGNSGVCLRMIMSKYPTLRKAINYDLPHMVDSAPHIPGSVTHIGGDALEYVPCCDAIFMKWIFLDWSDEECKQVMHNCYEALPANGKLIICEPVLPELTDNSQRTRTLLGGDIFTMTMYRPKGKHRTEKQFIEIATFAGFPRFRALYIDSYFVVFEFQK. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05166 369 Gene3D Vaccinia Virus protein VP39 119 369 IPR029063 -
Seca6g05166 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 366 IPR029063 -
Seca6g05166 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 369 IPR016461 GO:0008168
Seca6g05166 369 SUPERFAMILY "Winged helix" DNA-binding domain 14 118 IPR036390 -
Seca6g05166 369 Gene3D - 3 115 IPR036388 -
Seca6g05166 369 PANTHER O-METHYLTRANSFERASE 25 356 IPR016461 GO:0008168
Seca6g05166 369 PIRSF O-mtase 1 369 IPR016461 GO:0008168
Seca6g05166 369 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05166 Seca-Chr6 118757833 118760256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g05166 9 369 Monolignol Biosynthesis Gene Families AT3G53140 57.534 4.20e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05166 - - ccaj:109819366 454.521